| New model in OGS2.0 | DPOGS210806 |
|---|---|
| Genomic Position | scaffold456:+ 72747-80272 |
| See gene structure | |
| CDS Length | 1545 |
| Paired RNAseq reads | 17747 |
| Single RNAseq reads | 48364 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007121 (5e-142) |
| Best Drosophila hit | aconitase, isoform D (0.0) |
| Best Human hit | aconitate hydratase, mitochondrial precursor (0.0) |
| Best NR hit (blastp) | hypothetical protein [Antheraea yamamai] (0.0) |
| Best NR hit (blastx) | hypothetical protein [Antheraea yamamai] (0.0) |
| GeneOntology terms | GO:0005739 mitochondrion GO:0003994 aconitate hydratase activity GO:0006099 tricarboxylic acid cycle GO:0051539 4 iron, 4 sulfur cluster binding GO:0005811 lipid particle |
| InterPro families | IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha IPR018136 Aconitase family, 4Fe-4S cluster binding site IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 IPR006248 Aconitase, mitochondrial-like IPR015937 Aconitase/isopropylmalate dehydratase |
| Orthology group | MCL10824 |
Nucleotide sequence:
ATGGCTCACTGTACGAGAGTTTTACATGGCCAAGGTGGCAGGACGAGGCTTGCGCTCGTG
GAAATTCAGAAACGATGCTTCAGTGTATCACCATTAACCGCAGCAGCGGCCCAGGTCGCG
ATGTCAAAATTCGACAAAGCTCCTCTCCCGTACCAAAAGTTAACTCAGAATATCGAAATT
GTGAAGAAAAGGTTGGGCCGTGATTTGACCTTGTCCGAGAAGGTCTTGTACTCTCATCTG
GACGACCCTAAAGGACAGGAAATCGAACGTGGTACCAGCTATCTCCGCCTTCGTCCTGAC
CGTGTTGCGATGCAAGATGCCACAGCGCAGATGGCCATGCTACAGTTCATATCTTCAGGA
CTCCCCAGAGTGGCTGTTCCATCTACCATCCACTGCGATCACTTGATTGAGGCCCAAATC
GGCGGAGATAAAGATTTAGCAAGAGCCAAGGATATTAACAAAGAGGTATACAAGTTCCTT
GAAACAGCCGGTGCTAAGTACGGAGTGGGCTTCTGGAAACCTGGTTCTGGTATCATTCAC
CAGATCATCTTGGAGAATTACGCCTTTCCTGGTTTACTGATGATCGGTACCGATTCTCAC
ACTCCTAACGGCGGTGGTCTTGGTGGACTCTGCATTGGTGTTGGCGGAGCTGATGCTGTA
GATGTAATGGCCGACATCCCCTGGGAGCTGAAGTGTCCCAAGGTCATCGGTGTCAAACTC
ACAGGCAAGCTGAAGGGCTGGACGAGCCCTAAGGATGTGATCCTGAAGGTAGCCGGCATC
CTGACAGTGAAGGGAGGCACGGGCGCCATCGTGGAGTACCACGGACCTGGCGTCGACTCC
ATCTCGTGTACCGGCATGGCAACCATCTGTAACATGGGGGCCGAGATCGGCGCTACCACC
AGTGTGTTCCCTTACAACGCCCGTATGGAGGCCTACCTTAAATCCACCGGCCGTCACGAC
ATCGCCTCCGCCGCTAACAGCTACAAGAACCTCCTCACACCTGATCCCAAGGCGCCTTAC
GACCAGTTAATCGAAATCGACCTGTCTACATTGGAGCCCCACGTGAACGGTCCCTTCACG
CCCGACCTCGCCAACCCGATCTCCAAGTTGGGAGAGATCGCGAAGAAGAACGACTGGCCT
ATCGACATCAAGGTCGGCCTCATTGGCTCGTGCACCAACTCCTCGTACGAAGACATGGGA
CGCTGTGCCAGTATTGTCAAGGAGGCCCTGAGTCACGGCGTCAAATCCAAGATACCGTTC
AACGTGACCCCCGGCTCGGAACAAGTGCGCGCCACCATAGAGAGAGACGGCATCGCGCAG
ACACTCAGGGACTTCGGAGGAACCGTGTTGGCGAACGCCTGCGGTCCGTGCATCGGTCAA
TGGGACCGCAAGGACGTGAAGAAGGGGGATAAGAACACCATAGTGACGTCATACAACAGA
AACTTCACCGGCAGAAACGACGCCAACCCCGCCACCCACTGCTTCGTCACCAGCCCCGAG
CTGGTCACGGCTCTCTCACTGGCCGGTAACATATACATAAAGTAG
Protein sequence:
MAHCTRVLHGQGGRTRLALVEIQKRCFSVSPLTAAAAQVAMSKFDKAPLPYQKLTQNIEI
VKKRLGRDLTLSEKVLYSHLDDPKGQEIERGTSYLRLRPDRVAMQDATAQMAMLQFISSG
LPRVAVPSTIHCDHLIEAQIGGDKDLARAKDINKEVYKFLETAGAKYGVGFWKPGSGIIH
QIILENYAFPGLLMIGTDSHTPNGGGLGGLCIGVGGADAVDVMADIPWELKCPKVIGVKL
TGKLKGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATICNMGAEIGATT
SVFPYNARMEAYLKSTGRHDIASAANSYKNLLTPDPKAPYDQLIEIDLSTLEPHVNGPFT
PDLANPISKLGEIAKKNDWPIDIKVGLIGSCTNSSYEDMGRCASIVKEALSHGVKSKIPF
NVTPGSEQVRATIERDGIAQTLRDFGGTVLANACGPCIGQWDRKDVKKGDKNTIVTSYNR
NFTGRNDANPATHCFVTSPELVTALSLAGNIYIK