| New model in OGS2.0 | DPOGS211241 |
|---|---|
| Genomic Position | scaffold3017:+ 1662-2126 |
| See gene structure | |
| CDS Length | 321 |
| Paired RNAseq reads | 26 |
| Single RNAseq reads | 487 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005169 (3e-53) |
| Best Drosophila hit | Transcription-factor-IIA-S (4e-48) |
| Best Human hit | transcription initiation factor IIA subunit 2 (3e-43) |
| Best NR hit (blastp) | transcription initiation factor IIA gamma chain [Bombyx mori] (3e-51) |
| Best NR hit (blastx) | transcription initiation factor IIA gamma chain [Bombyx mori] (2e-49) |
| GeneOntology terms | GO:0005672 transcription factor TFIIA complex GO:0016251 general RNA polymerase II transcription factor activity GO:0006367 transcription initiation from RNA polymerase II promoter GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0005634 nucleus |
| InterPro families | IPR015872 Transcription initiation factor IIA, gamma subunit, N-terminal IPR009088 Transcription factor IIA, beta-barrel IPR003194 Transcription initiation factor IIA, gamma subunit IPR009083 Transcription factor IIA, helical IPR015871 Transcription initiation factor IIA, gamma subunit, C-terminal |
| Orthology group | MCL12090 |
Nucleotide sequence:
ATGTCATATCAACTTTACAGGAATACTACAATTGGAAACACGTTACAGGAAAGCCTTGAC
GAATTGATACAGTATGGTCAAATAACACCTACGCTCGCTGTGAAAGTATTGTTACAGTTT
GATAAATCTATTAACACAGCATTGTCTAACAGGGTGAAATCTAGATTAACCTTTAAAGCG
GGGAAATTGAATACATACAGGTTTTGTGATAATGTTTGGACATTTATGTTGAATGATGTA
GAATTCAGGGAGGTTCAAGAAGTTGCTAAGGTGGATAAAGTGAAAATAGTTGCCTGTGAT
GGAAAGAGTGAGTTGCCATAA
Protein sequence:
MSYQLYRNTTIGNTLQESLDELIQYGQITPTLAVKVLLQFDKSINTALSNRVKSRLTFKA
GKLNTYRFCDNVWTFMLNDVEFREVQEVAKVDKVKIVACDGKSELP