| New model in OGS2.0 | DPOGS213777 |
|---|---|
| Genomic Position | scaffold2057:- 1838-3397 |
| See gene structure | |
| CDS Length | 480 |
| Paired RNAseq reads | 59 |
| Single RNAseq reads | 372 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009262 (3e-58) |
| Best Drosophila hit | CG6951, isoform A (1e-42) |
| Best Human hit | deoxycytidylate deaminase isoform b (9e-50) |
| Best NR hit (blastp) | deoxycytidylate deaminase [Culex quinquefasciatus] (2e-65) |
| Best NR hit (blastx) | DCMP deaminase [Bombyx mori] (9e-66) |
| GeneOntology terms | GO:0016787 hydrolase activity GO:0003824 catalytic activity GO:0008270 zinc ion binding GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR016192 APOBEC/CMP deaminase, zinc-binding IPR015517 Cytidine deaminase IPR016473 dCMP deaminase IPR016193 Cytidine deaminase-like IPR002125 CMP/dCMP deaminase, zinc-binding |
| Orthology group | MCL14538 |
Nucleotide sequence:
ATGGCCACTGCATTCTTAGCTGCAAAACGAAGCAAAGATCCAAGTTATCAAGTCGGTGCT
TGTATAGTGAACAAGGAAAATAAAATAGTTGGTGTTGGATACAATGGTATGCCAATTGGT
TGTAGTGATGATGAATTTCCATGGGGAAAAAATACGACATCCAAATTAGATAGCAAATTT
TTATATGTGTGTCACGCTGAAATGAATGCCATTCTGAATAAGAACTCCTCCGATGTTAAG
GACTGCACTATTTATGTTGGACTATTTCCATGTAATGAGTGTGCAAAAATCATTATACAG
TCTGGTATAACTGAAGTTATATATTTTTCTGATGAAAAAGGACACAAACCTAAGTACATA
GCTTCAAAGAAGATGTTTGACGCTGCCGGTGTGAAGTATTGGCAATATATCCCAAAGAAT
AACAAGATAGAGATAACATTCTCCGGTGCAGATTGGCAGAACACGAGTTCTTCAAATTAA
Protein sequence:
MATAFLAAKRSKDPSYQVGACIVNKENKIVGVGYNGMPIGCSDDEFPWGKNTTSKLDSKF
LYVCHAEMNAILNKNSSDVKDCTIYVGLFPCNECAKIIIQSGITEVIYFSDEKGHKPKYI
ASKKMFDAAGVKYWQYIPKNNKIEITFSGADWQNTSSSN