Genomic Position | scaffold2515:+ 13575-16655 |
---|---|
See gene structure | |
CDS Length | 606 |
Paired RNAseq reads   | 139 |
Single RNAseq reads   | 634 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003522 (1e-38) |
Best Drosophila hit   | CG8336, isoform C (1e-41) |
Best Human hit | peptidyl-prolyl cis-trans isomerase D (5e-41) |
Best NR hit (blastp)   | peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Chlamydomonas reinhardtii] (2e-53) |
Best NR hit (blastx)   | peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Chlamydomonas reinhardtii] (3e-45) |
GeneOntology terms    | GO:0005488 binding GO:0003755 peptidyl-prolyl cis-trans isomerase activity GO:0006457 protein folding GO:0005575 cellular_component GO:0016853 isomerase activity |
InterPro families    | IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type IPR015891 Cyclophilin-like |
Orthology group | ND |
Nucleotide sequence:
ATGATAACGGAGCTCCAACAAAAACACAGGAACCCTTTAGTATTCCTAGATATTTTAATT
GATGGAGAGAAAGCCGGGAGAATTGTGATAGAATTAAGATATGATGTTGTGCCTAAAACT
GCTGAGAATTTTCGTGCCTTATGCACAGGAGAAAAGGGGATTGGTATTCATGGAAAAGCA
CTACACTTCAAAGGAGTTAGATTTCACAAAGCGATCACACAATTCATGATCCAGGGTGGT
GATATCATACATGGTAATGGTACCGGCGGTGAGAGCATCTACGGCCTGACCTTCGAAGAT
GAAAACTTCAAGCTTATTCATGAAGCAGGTGTCCTCAGTATGGCGAATGCTGGGCCAAAT
ACGAACGGATCACAATTTTGCATCACCAGTGTGCCTTGTCCACAACTAGATGGCACTAAC
GTAGTTTTTGGACGGGTGCTGGCTGGCCTGGGGATAGTTCAGGAGATACAGAGCCTGTCC
AGTGACGATACGCCCTCGGTCGATTTGGTAAAATTGATAAAAGTGCCATCTATAAACGTA
AAAACTAACATTTTCGATCGTCCGCTGCTAGCTCCTAGCGTCGCTTCCCAGCCAGAGCGG
TCGTAG
Protein sequence:
MITELQQKHRNPLVFLDILIDGEKAGRIVIELRYDVVPKTAENFRALCTGEKGIGIHGKA
LHFKGVRFHKAITQFMIQGGDIIHGNGTGGESIYGLTFEDENFKLIHEAGVLSMANAGPN
TNGSQFCITSVPCPQLDGTNVVFGRVLAGLGIVQEIQSLSSDDTPSVDLVKLIKVPSINV
KTNIFDRPLLAPSVASQPERS