| New model in OGS2.0 | DPOGS213526 |
|---|---|
| Genomic Position | scaffold772:- 1696-3683 |
| See gene structure | |
| CDS Length | 1494 |
| Paired RNAseq reads | 362 |
| Single RNAseq reads | 875 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011808 (0.0) |
| Best Drosophila hit | lariat debranching enzyme, isoform B (7e-115) |
| Best Human hit | lariat debranching enzyme (6e-108) |
| Best NR hit (blastp) | lariat debranching enzyme [Culex quinquefasciatus] (9e-139) |
| Best NR hit (blastx) | lariat debranching enzyme [Culex quinquefasciatus] (2e-138) |
| GeneOntology terms | GO:0000375 RNA splicing, via transesterification reactions GO:0005634 nucleus GO:0008419 RNA lariat debranching enzyme activity |
| InterPro families | IPR007708 Lariat debranching enzyme, C-terminal IPR004843 Metallo-dependent phosphatase |
| Orthology group | MCL13573 |
Nucleotide sequence:
ATGAAAATTGCTATAGAGGGATGTGCACATGGTGAATTGGATAAGATATACGAGTGTGTA
GAAACTTTACAGAGAAGAGAAGGAATAAACGTGGATTTGTTAATATGTTGTGGAGATTTT
CAATCAGTCCGCAATAATGATGACCTTAGGGCTATGGCTGTACCAGAGAAATATCAAAAC
ATATGTACATTCTACAAATATTACAGTGGTGAAAAAATCGCTCCAGTATTAACTTTATTT
ATTGGAGGCAATCATGAAGCTTCAAACTATTTACAAGAGCTGCCATATGGTGGCTGGGTT
GCACCAAACATATACTTCTTGGGCAGAGCCGGTGTTGTACAGTTTGGCAATTTACGAATT
GGAGGACTATCAGGAATATTTAAAGGCCATGATTATTTACAAGGTCTCTGGGAATGTCCT
CCTTACACCCCTGGTTCACTGAGATCAGTTTATCATATAAGATCTCTGGATGTGTTTCGG
TTAAGTCAAATGAAAGAAAACATCCACATCATGTTATCACATGATTGGCCGAGGGGTATC
ACTAGTTATGGGGATAAAGAGAATTTACTAAGAAGGAAACCGTTCTTACGAGATGATATT
GAGTCAAACCAACTAGGTAGTCCCCCAGCGGAGAAGTTGTTACACACATTGAAGCCTCAG
TACTGGTTTGCTGCACATTTGCATTGCCAATTTGCTGCCGTTATTAATCATGACAATAAT
CGGGAAACAAAATTTCTTGCTCTAGATAAATGTTTGCCACGAAGAAGGCATTTGCAAATA
TTAGATTTAGCAACAGAGTATGACGGTGACAAGACTTTAAAGTATGATCCTGAATGGTTG
GCAATTTTGAGAAATACCAATCATCTTTTATCCGTCAAGAACGTAGATTGTCATCTACCT
GGCCCCGGAGGTGATGAACGGTATGATTTCACACCAAGTGAAGAAGAGAAAAATGCAATA
TTAAGTCTATTAGATACATTAATAATAACCAATGATTCATTCGTCAAAACTGCACCGGTT
TATAGGCCTGGTGCACCAAAATGTCAACCCACGGAACCTGTGCTAAACCCCCAAACCGCT
TATTTATGTGAAAAGTTAGGTATTGATGATCCCATCCAGGTGATAATCGCTCGTTCAGGC
AGAACTATAAGGCATGTACAAATTGAAAATAATCAGAATGAAGAGAAAGATGACATTATT
GAACAGACACCATTCAAATGTTCAAAGCTTTCTCTCCCGGCTCCAATAACACCCAGTGGG
AATGACGAGGACGCTTCAAGAGAAACATTAGCTTGTACACCAGAAAATAGTTTTTTATCT
ATCAGTAATACATCAGATTGTATAACACCTCCGAGTGCTACAAAAAAGGTTTTCAAGAGA
CGTAATCTAGCTATATACACTCCTGAGGAAGAGCCGGAGAGTGATTCAAGTAGTTCGTTC
ATGAGTACACAGAGTCCAAGATCGAGTAAAATATTCTGTAAAAATGACTTATAA
Protein sequence:
MKIAIEGCAHGELDKIYECVETLQRREGINVDLLICCGDFQSVRNNDDLRAMAVPEKYQN
ICTFYKYYSGEKIAPVLTLFIGGNHEASNYLQELPYGGWVAPNIYFLGRAGVVQFGNLRI
GGLSGIFKGHDYLQGLWECPPYTPGSLRSVYHIRSLDVFRLSQMKENIHIMLSHDWPRGI
TSYGDKENLLRRKPFLRDDIESNQLGSPPAEKLLHTLKPQYWFAAHLHCQFAAVINHDNN
RETKFLALDKCLPRRRHLQILDLATEYDGDKTLKYDPEWLAILRNTNHLLSVKNVDCHLP
GPGGDERYDFTPSEEEKNAILSLLDTLIITNDSFVKTAPVYRPGAPKCQPTEPVLNPQTA
YLCEKLGIDDPIQVIIARSGRTIRHVQIENNQNEEKDDIIEQTPFKCSKLSLPAPITPSG
NDEDASRETLACTPENSFLSISNTSDCITPPSATKKVFKRRNLAIYTPEEEPESDSSSSF
MSTQSPRSSKIFCKNDL