| New model in OGS2.0 | DPOGS213780 |
|---|---|
| Genomic Position | scaffold1596:+ 32233-34884 |
| See gene structure | |
| CDS Length | 861 |
| Paired RNAseq reads | 290 |
| Single RNAseq reads | 1148 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009265 (5e-70) |
| Best Drosophila hit | nuclear factor Y-box A (8e-17) |
| Best Human hit | nuclear transcription factor Y subunit alpha isoform 1 (2e-18) |
| Best NR hit (blastp) | PREDICTED: similar to nuclear transcription factor Y, alpha like [Tribolium castaneum] (1e-45) |
| Best NR hit (blastx) | transcriptional activator HAP2, putative [Pediculus humanus corporis] (1e-24) |
| GeneOntology terms | GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0045893 positive regulation of transcription, DNA-dependent GO:0045944 positive regulation of transcription from RNA polymerase II promoter GO:0045449 regulation of transcription GO:0006355 regulation of transcription, DNA-dependent GO:0006350 transcription GO:0016602 CCAAT-binding factor complex GO:0003677 DNA binding GO:0005515 protein binding GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0016563 transcription activator activity |
| InterPro families | IPR001289 CCAAT-binding transcription factor, subunit B |
| Orthology group | MCL16802 |
Nucleotide sequence:
ATGGAGCATGCACAGATCCAAACGTCAGATGGTACACAAGTGATGACCATCAATGGGCAA
CAGCTGCAAGTGCTGCAAATGAACAACAGTCCCCACATGATTCAAGGTCCTAATGGACAA
CAAATAGTCATACATGCTATACCATCAACAGCACCGACCATACAGGTGGCAACCCCGACT
GGTCAGCAATTACAGCAACTACAAGTACTACCACTATCTAGTTTACAAGGTACAAGCAAC
AATATACAGCCGATGCAGTTAGTTCAGACTCCTGACGGACAAACATACATCTATCAACCC
ACAGCAAGCGCACCACAACCACAGATTGACCAACATCAGATTATACACCAACCCGGCACC
CTATTGAACTTGAATGGAAATTTACTACAAGTGGCAGGTGTTGGCGGAGTACAACCACAA
CAAATTGTCAATCAGCCGAACATAGTCATGATGGTAAATGGCAACACAGCCTCATCGAGC
GAAGGGGCCACATCCACAGCGGGGTCTGACGAGGAGCCGTTACTGTATGTCAACGCCAGG
CAATACAAACGTATACTGAAGAGACGAGCAGCTAGGGCTAAATTACACGAACAAGGGAAA
ATACCTAAAGAAAGACCTAAATATCTTCATGAGTCGAGACACAGGCACGCCATGAACAGG
ATAAGAGGTGAAGGTGGGAGATTTAATTCCGGCAGCAGGAAGAATATGGAACAACAGGAA
CAGAATACGTCCACCCAGGCTATATTGGATGACATCAAGCCCGATACAGTCTCTATAACA
ATAATTCAGGATGAAGAATTACAAGAGACCCAAACGAATCAATGGCGAAGACTGGCCCCA
CAACCGATGACATCGACATAG
Protein sequence:
MEHAQIQTSDGTQVMTINGQQLQVLQMNNSPHMIQGPNGQQIVIHAIPSTAPTIQVATPT
GQQLQQLQVLPLSSLQGTSNNIQPMQLVQTPDGQTYIYQPTASAPQPQIDQHQIIHQPGT
LLNLNGNLLQVAGVGGVQPQQIVNQPNIVMMVNGNTASSSEGATSTAGSDEEPLLYVNAR
QYKRILKRRAARAKLHEQGKIPKERPKYLHESRHRHAMNRIRGEGGRFNSGSRKNMEQQE
QNTSTQAILDDIKPDTVSITIIQDEELQETQTNQWRRLAPQPMTST