| New model in OGS2.0 | DPOGS207274 |
|---|---|
| Genomic Position | scaffold245:- 22474-23578 |
| See gene structure | |
| CDS Length | 924 |
| Paired RNAseq reads | 151 |
| Single RNAseq reads | 492 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000669 (2e-10) |
| Best Drosophila hit | suppressor of cytokine signaling at 16D (7e-13) |
| Best Human hit | suppressor of cytokine signaling 6 (4e-21) |
| Best NR hit (blastp) | suppressor of cytokine signaling 6 [Oncorhynchus mykiss] (8e-26) |
| Best NR hit (blastx) | SOCS box SH2 domain-containing protein [Ixodes scapularis] (3e-21) |
| GeneOntology terms | GO:0005515 protein binding GO:0023034 intracellular signaling pathway GO:0040008 regulation of growth |
| InterPro families | IPR000980 SH2 motif IPR001496 SOCS protein, C-terminal |
| Orthology group | MCL18480 |
Nucleotide sequence:
ATGAACAAAAATTATGAACGATGTACCCATTGTAACAGGCGCAAGTGGTTGGCTACTGGA
TGTCTACGAAAATGGTTAAAACCTATGGAATGTAAACACTTACAACGAAGTATTGATAGC
AAACGAGATTTCAGTAATACAGACATTGTGAACTGTGTTTTTTTACCTGATCGAAAACCG
CCCAGTAATACCAACAAATTTATAAAGTTCTGGAAAAATAAATTGTTTATCACTGGTAGT
GTCCGTTCATTACAAAGATACTTTGGTAATAAAAATCGTGATGGAGAGTTTATGTGTGAT
TTTAACAAAACAGCGGATCCATGCACATCAAGACAAATTATAACAGTGACAAATGAAGTG
AAAAAAGATATTTTAGCAGAACATATTACTATGAAGTGTAAACATTCAGATGGCCACTCA
GTTCTTAGAGGGCATCATCAACATGTATCAGTAGAGAGCTGTGCTATATATTGTCAACTC
TCAAAACATGGCTGGTATTGGGGAGGAATAACATCCAGTGAGGCTGAAGAGCTTCTTGCA
GGCCAACATGACAATGTATTCTTGGTACGAGATTCTTATGACTTAAGACACATTCTCTGT
GTGTCATTTCGATGCGTTGGCCGAACTCTACATGCTCGACTCAGGCATGCCAATGGTCTT
TTTTCTTTAAACAATGAAACTTTTGTGCCAGCAAACAGAATATCAGAACATTGTGCCACT
GTAGATGTAAAGTCCAATTTATTTGAAATGCCAGTGAAATTAGCAAGACCTTTAAACAGG
TTTGCAAAGTTAGACTCTCTACAAAAGATCTGCAGATTTGTGATAAGGCAAACTGTCTCA
GATAATTTATGGAATAAACTGCCACTTCCTCCAAATTTAATATATTATGTATCTTGCGGT
AGTGATTACATCGCACCTGTATAA
Protein sequence:
MNKNYERCTHCNRRKWLATGCLRKWLKPMECKHLQRSIDSKRDFSNTDIVNCVFLPDRKP
PSNTNKFIKFWKNKLFITGSVRSLQRYFGNKNRDGEFMCDFNKTADPCTSRQIITVTNEV
KKDILAEHITMKCKHSDGHSVLRGHHQHVSVESCAIYCQLSKHGWYWGGITSSEAEELLA
GQHDNVFLVRDSYDLRHILCVSFRCVGRTLHARLRHANGLFSLNNETFVPANRISEHCAT
VDVKSNLFEMPVKLARPLNRFAKLDSLQKICRFVIRQTVSDNLWNKLPLPPNLIYYVSCG
SDYIAPV