New model in OGS2.0 | DPOGS207281  |
---|---|
Genomic Position | scaffold245:+ 24214-38408 |
See gene structure | |
CDS Length | 3006 |
Paired RNAseq reads   | 1190 |
Single RNAseq reads   | 3153 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011744 (0.0) |
Best Drosophila hit   | CG1399, isoform E (1e-112) |
Best Human hit | leucine-rich repeat-containing protein 16A isoform 2 (5e-74) |
Best NR hit (blastp)   | PREDICTED: similar to CG1399-PB [Nasonia vitripennis] (2e-157) |
Best NR hit (blastx)   | PREDICTED: similar to CG1399-PB, isoform B isoform 2 [Apis mellifera] (3e-119) |
GeneOntology terms    | GO:0017024 myosin I binding GO:0042384 cilium assembly |
InterPro families   | IPR003590 Leucine-rich repeat, ribonuclease inhibitor subtype |
Orthology group | MCL10980 |
Nucleotide sequence:
ATGTCAACAAAATCCCAAATAACTACAGAATTAAGCGAGAGCATCGGAAATGTATTGGGA
AAAAATGTTAAAATACTTTATAAATCCCTTATTCGTATGGAATCAAGAGGGGATAAAGTG
GATAATCGCGTTTTGGTTGTGACTGCTTATAGAGTATTTATAACAACAACTAAAGTGCCA
ACAAGGATTGACAATGGATTTCACTTAATGGAGATTGAAGCTCTCGAGAGCAAGAAAAAT
AATCATTTGTCAATAACTCTCATTCATGAACATAAGCCCGTCTCGATCCTCATTGGCGAA
GAAGGTTCGTCGGAAGGAGTTATTAATGCTATCCACGCTCTGATCGCAGCATTTGATGAC
TTATTTCCTAATGTTGCGATGGAGGACATCGTCGCCAAGGTGAATTTGCCATTTCCTCTA
CATCCTATTTGTGGTACAAGAAAACATTCAACATGTGGTGATTTCTCTAACCAATACGCG
GCTATGTGCGACCTCTGTCAGACGCCGTTCAGAGCCGAGGTCGCTTGGGACATTGACACA
ATTTATCTAGCGCACGACATAAGAATGCTACATCTCAAAGATTTCGATCATTTGGATCAA
AGAGATCTGATCCCCTTGGTGATGGCGCTTCAACACAACACTTGGTTCGAGGGTGTGTGC
GGGGACGGGGTGCGTGTGGGAGGGGAGGCGTGGGAGGCCGTGGGTCGCCTGGTCCGCTCG
GCCTGTCCCCCTCCGAGGCGGCTCTCCTGGAGGGGCGCAGCCCTGAGACACGATCACGCG
GCGCGGCTAGGACACGCGCTCGCTCGAGCGCCGCGACCACCAGCGCTACATACCATCGAT
CTATCCCAGAATCATATCGAGGATAAGGGCGCCATCAGTATCCTGACGGGTCTGTCCAAC
AACCCCAGCGGTCTTCGTTCCATCTCCCTGTCTCAGTGCGGCGTGACGGGGAAGACGGTG
TGCCAACTGGCTGTGATGTTGAACGACGCGCCCGCACACCTCAACACGTTAGCACACTTG
GACCTCTCACATAACAACCTCAAGGATGACGTTCATAATTTGTACAACTTCCTTGCACAA
CCCAACGTATTGACACATTTAAATTTAACAAACACCGAGACGACATTAGAAAATATATGG
GGTGCTCTACTCCGCGGCTGCGCTGCCCGTCTGTCGACTCTCCTCCTGGCTCGTAACCCG
TGGTCTCAGAGCCGCCGGGCGAAGGACCCGCCTCCGTCCTTCAGACAGTTCTTCACAGCC
TGCCTGGCGCTCACCGATCTAGACTTCTCATACTGTAAGATGCCGCCGGACGCTCTCAAG
AGTCTCCTGCTGGGGCTGGCGTGCAACGAGAGCGCGGCGGGTGTGAAGCTGTCGCTGGCG
GGGTCTCTGACGTCATCGCAGGCGGCGCACGTGCTCGAGTCGTGCGTGCACGGAGTGCGG
TGCCTCAACACGCTCGACCTGTCCGACAACAGTATGGAATGGGAATTATCTGGAATTGTA
AGGGCCGTGGGAAAGAATCACTCAATAACGCATTTATCTTTAAGCAAGTTGACAGGGAAA
CGTTCGTACGCTCCGCCTTTAATACAGGCTTTGGTTCATGTTTTACAAGAACCCGATACG
GCGTTGACGTCTTTAGATCTCAGTGACTGTAAGCTTAAGAGCGATTTGTACGGTTTATTG
AACGCGTTGGGCGGTGCGCGGAGACTGCGCGTGTTGGACGTGGGAGGCAACCTGGCGGGC
GACGCCGGGGCGCGGCTACTAGCTAAGGCTTTACAATGCAACTGTACATTACACACGCTA
TACATAGACAGGAACGCTTTTAGTTTGCAAGGCCTGACGGATATATCGTCAGCGTTGCGA
CGCTCGGTGTCTGTGCGCCGCGTGGAGTTCCCCGGCTGTGACGCCGCGGCCGGCGGGCGG
GGCGCCTCGGAGAGAGTCGCAGCTCTGTGGAGAGAACTACACGAACGGGAAGTGCTGCTA
TCGCCGCGGGCGACTTCAAGGCGCTGTAGAACGGACTCGCGCTGTAGTGAAGTGTTCGCA
GCCATGGGCGGGTCTGTGGGCGGAGGGGAACTGGTCACTCTCCAGGCTGTGAGGGACGCC
ATGGCTCCCTGCAACAACACGCTGCAAGACTTGCTCAATGAAGCCGTAGAGAGATTGGCT
CTGTCGGCCTGTGAGAGTGTGGAGAGCGCGGACAGTGACCGAGGACCCGCGGTCGACGCC
GACATACCGGATCTCCTGTCACCCATATCACACTCCGGGGCTACACCGCTCGGGTGTCGT
CGTCGCGAGCGCGGTCGTCGCGTCCGGCCCAAGTCTGTGGCAGAGCAGCAGCAGTGCAGC
AGCAACGAGATGCTGTCCCTGCCGCCGCTACACGCTGAGGCAGCCGACGGACTGGCAGAC
CTACCCGCACATACGCTCAGACATCTAGTGAAAGGTCGACCGCGGAGGGTGAAGACGAGG
GCGCCGACACGACCGGTGACGGATCAGTCACAAGACATAGACGAAGGCCTAGAGGAGTTC
TGGCGCACGTGTCGCACGCCGCCCGGCAGCGAGGAGGCGTCGCTGTCGGCTCGCACGCCT
CTGACGTCACGCTCGCTGCACTCCCTGTCCTCGCTGGCCTCCGCCTCGCCCGCCTCGCCC
GCCTCGCCCTCGCCGCTCCGACACTCGCCCACACTCCGCAGGGACGACACCATGTACAGT
GTGACGTCCGGTGAAAGTACTCCTGTGCTTTTGGAATGTGAGGTATCTCGCTGCAAGTCT
TCCGACAACGTGGGCAGTAAGTTACCCACCACGCCGCCGCCGTCTCGTTCCTCAGATAAC
GTTAACACTATGGGCGTAGGATGTACTCGTTCGGGCGGCAAGGCTCGTCCGTGGTCGGTG
GCGGGGGTCAACGCGGACAACGCGCTCTGCACCACAGAGGGCGTCGAGGCGTGCGTGGGC
GGCAGCATCGTGGGCATCACTCCCGGCGCCGCACTAACCAGTAACACACACGCTATACTA
TACTGA
Protein sequence:
MSTKSQITTELSESIGNVLGKNVKILYKSLIRMESRGDKVDNRVLVVTAYRVFITTTKVP
TRIDNGFHLMEIEALESKKNNHLSITLIHEHKPVSILIGEEGSSEGVINAIHALIAAFDD
LFPNVAMEDIVAKVNLPFPLHPICGTRKHSTCGDFSNQYAAMCDLCQTPFRAEVAWDIDT
IYLAHDIRMLHLKDFDHLDQRDLIPLVMALQHNTWFEGVCGDGVRVGGEAWEAVGRLVRS
ACPPPRRLSWRGAALRHDHAARLGHALARAPRPPALHTIDLSQNHIEDKGAISILTGLSN
NPSGLRSISLSQCGVTGKTVCQLAVMLNDAPAHLNTLAHLDLSHNNLKDDVHNLYNFLAQ
PNVLTHLNLTNTETTLENIWGALLRGCAARLSTLLLARNPWSQSRRAKDPPPSFRQFFTA
CLALTDLDFSYCKMPPDALKSLLLGLACNESAAGVKLSLAGSLTSSQAAHVLESCVHGVR
CLNTLDLSDNSMEWELSGIVRAVGKNHSITHLSLSKLTGKRSYAPPLIQALVHVLQEPDT
ALTSLDLSDCKLKSDLYGLLNALGGARRLRVLDVGGNLAGDAGARLLAKALQCNCTLHTL
YIDRNAFSLQGLTDISSALRRSVSVRRVEFPGCDAAAGGRGASERVAALWRELHEREVLL
SPRATSRRCRTDSRCSEVFAAMGGSVGGGELVTLQAVRDAMAPCNNTLQDLLNEAVERLA
LSACESVESADSDRGPAVDADIPDLLSPISHSGATPLGCRRRERGRRVRPKSVAEQQQCS
SNEMLSLPPLHAEAADGLADLPAHTLRHLVKGRPRRVKTRAPTRPVTDQSQDIDEGLEEF
WRTCRTPPGSEEASLSARTPLTSRSLHSLSSLASASPASPASPSPLRHSPTLRRDDTMYS
VTSGESTPVLLECEVSRCKSSDNVGSKLPTTPPPSRSSDNVNTMGVGCTRSGGKARPWSV
AGVNADNALCTTEGVEACVGGSIVGITPGAALTSNTHAILY