| New model in OGS2.0 | DPOGS207282 |
|---|---|
| Genomic Position | scaffold245:+ 53697-55977 |
| See gene structure | |
| CDS Length | 1551 |
| Paired RNAseq reads | 1180 |
| Single RNAseq reads | 3317 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012013 (0.0) |
| Best Drosophila hit | CG10077, isoform A (2e-124) |
| Best Human hit | probable ATP-dependent RNA helicase DDX17 isoform 3 (1e-118) |
| Best NR hit (blastp) | GD13105 [Drosophila simulans] (4e-133) |
| Best NR hit (blastx) | ATP-dependent RNA helicase p62 [Tribolium castaneum] (6e-130) |
| GeneOntology terms | GO:0003724 RNA helicase activity GO:0003676 nucleic acid binding GO:0005524 ATP binding GO:0008026 ATP-dependent helicase activity GO:0005875 microtubule associated complex |
| InterPro families | IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR014014 RNA helicase, DEAD-box type, Q motif IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal |
| Orthology group | MCL40703 |
Nucleotide sequence:
ATGGCATTAAACATAATAAAAAACCTGTCACGGAACCCTGCTGTACTTAAATTGTGTTGC
AGAGATATAACTAATATCTGCTTTAATAAATCCTGTTTTGCTGCAAAAAACAGTCGAATA
CTTACCTACACAACTTTATCAAGTTACCAAAAACATCAGTTTATAAGATACTCTTCGGTA
CCTGCTGCTCAAAGTGATGCTGATTATTGCCGTGAAAATAAAATAACAATAATAGGCGAT
GACATTCCCAGTCCAGTAAGAGACTTGGACAGTGGAAACTTTCCAGATTATATTAAGAAT
TTTCTTCAAGAGCAGGGCTTTACCAAGCCTACACTGATCCAGTCCCAAGGATGGCCAATT
GCTATGGCGGGGAAAAATTTTGTTGGTATCGCTCAAACAGGTACAGGTAAAACTCTTGCA
TATTTGCTGCCAGCAGTTATTCAACTAAAAGAAAATAAAGGACGAAGGGGTAAGGGTCCA
AGAGCATTAGTACTGGCTCCTACAAGAGAACTTGCAAGACAGATAGAGGAAGTTGCTAAA
GATTTTGAAAGGCTTTTGAACATCCGTTGTCTATGTATATATGGAGGTGTGAGCAGATCT
AATCAAGCTCAACAGTTGCAACGGGGTGTAGATATCCTAATTGCTACACCTGGCAGATTA
AATGATTTTCTTAACAGCAGAGTGACGACTTTAAGCAGATGTACATATGTGGTGTTGGAT
GAAGCTGATAGAATGTTAGACATGGGCTTTGAACCTCAGATCAGGCAAGCATTGGAAGAT
GTACCATATGAAAGACAAATCCTTATGTTCTCAGCAACATGGCCTAAGGAAGTACAACAT
TTAGCTAAAGATTATCTAGGAGAATTTGTACAGGTTAATGTGGGTTCTACAGAATTGACA
GCCAATCATAATATCAAACAATGCATATATGTTTGTGAACAAGACCAAAAAATGGATAAA
TTCAAATCTATCATGCATGAAATATCAGGCAATGGTTTTGGTAAGGTTCTGGTGTTCACA
AATACAAAGAAATTTGTAGATAGCTTGACACTGGCACTACAAAGAAATGGCTGGCCGGCG
GTCGGCATACATGGTGACAAAACGCAACTTCAAAGGGATATTATTATTAATAAATTTAGA
AGCGGAAAAACTAATATTCTTGTTGCCACAGATGTTGCTGCAAGAGGCTTAGATGTTGAT
GGTGTAACACATGTTGTGAACTATGATTTTCCAAACACATCAGAAGATTATATCCACAGA
ATTGGAAGAACTGGCAGATCAGATAATAAGGGTGTAGCTCATACTATCTTAACAAGCGAG
AATGCTCGACAAGCAAGAAGTCTTATACAAGTACTCAAGGAAGCAAAACAGGAAGTTCCA
CATGAATTGGAACAGCTGTGCCGTGATTACGGCAGCATGAAGTTCAAGGAGCAGCAGACG
AAATATAAACCTAAAAACAATTATAAATGGAAGAATTATAATAACAGGAATTATAACAGA
GACGGTTGGAACTCACGCGACAAGTTTGGCAGTATGCGTGAAATGTATTAG
Protein sequence:
MALNIIKNLSRNPAVLKLCCRDITNICFNKSCFAAKNSRILTYTTLSSYQKHQFIRYSSV
PAAQSDADYCRENKITIIGDDIPSPVRDLDSGNFPDYIKNFLQEQGFTKPTLIQSQGWPI
AMAGKNFVGIAQTGTGKTLAYLLPAVIQLKENKGRRGKGPRALVLAPTRELARQIEEVAK
DFERLLNIRCLCIYGGVSRSNQAQQLQRGVDILIATPGRLNDFLNSRVTTLSRCTYVVLD
EADRMLDMGFEPQIRQALEDVPYERQILMFSATWPKEVQHLAKDYLGEFVQVNVGSTELT
ANHNIKQCIYVCEQDQKMDKFKSIMHEISGNGFGKVLVFTNTKKFVDSLTLALQRNGWPA
VGIHGDKTQLQRDIIINKFRSGKTNILVATDVAARGLDVDGVTHVVNYDFPNTSEDYIHR
IGRTGRSDNKGVAHTILTSENARQARSLIQVLKEAKQEVPHELEQLCRDYGSMKFKEQQT
KYKPKNNYKWKNYNNRNYNRDGWNSRDKFGSMREMY