| New model in OGS2.0 | DPOGS212224 |
|---|---|
| Genomic Position | scaffold123:- 77453-102262 |
| See gene structure | |
| CDS Length | 4251 |
| Paired RNAseq reads | 3872 |
| Single RNAseq reads | 9883 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004412 (0.0) |
| Best Drosophila hit | short stop, isoform H (0.0) |
| Best Human hit | plectin isoform 1g (9e-102) |
| Best NR hit (blastp) | PREDICTED: similar to kakapo [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to short stop CG18076-PH, isoform H [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0016203 muscle attachment GO:0007517 muscle organ development GO:0003779 actin binding GO:0007017 microtubule-based process GO:0008017 microtubule binding GO:0016204 determination of muscle attachment site GO:0048813 dendrite morphogenesis GO:0005856 cytoskeleton GO:0008092 cytoskeletal protein binding GO:0030516 regulation of axon extension GO:0035147 branch fusion, open tracheal system GO:0035149 lumen formation, open tracheal system GO:0007424 open tracheal system development GO:0007423 sensory organ development GO:0007409 axonogenesis GO:0005874 microtubule GO:0007475 apposition of dorsal and ventral imaginal disc-derived wing surfaces GO:0016319 mushroom body development GO:0000226 microtubule cytoskeleton organization GO:0030036 actin cytoskeleton organization GO:0045169 fusome GO:0007026 negative regulation of microtubule depolymerization GO:0030716 oocyte fate determination GO:0005912 adherens junction GO:0005509 calcium ion binding GO:0007050 cell cycle arrest GO:0000235 astral microtubule GO:0005515 protein binding GO:0016199 axon midline choice point recognition GO:0030426 growth cone |
| InterPro families | IPR001715 Calponin homology domain IPR018159 Spectrin/alpha-actinin IPR002017 Spectrin repeat |
| Orthology group | MCL10145 |
Nucleotide sequence:
ATGTCGATGTACAGATTCGTGAAAGAGGGCAGCAGTAAGAGGCTCTTCGTCCAAGGCACT
CTCGAAAGTGATGAATCGAAGCCACTGAAGTCGAGTCTCAAAAAGCCCGCTCCATCGCCA
GTGGGATCTCCCATCACGACCAGTCTGAACCTAGCTTCTGTGCCAAGAAGTCTGAGGGAC
AGTTTGACGAGAAACGAAACTGTGTACGATGGTAACTATCCTGGAATGGAAAGAACCAGC
TACCGGTCTGGGTCGTACAGAGAAGAGAGCTACAACGGTCGTATAGTACATGACGGCAAT
CAGACACATTTCGAATACGATGGAGATAGCGCACTGGCTGTGCCGCTCTCGGCGGGAGGT
AGAGGTCTGTCGGAACTGCAGGAGATTCATACGAACAAGCGTTTGTCGACCGAGGTCCTT
GGCTCCTCGCTGGAGTCCACAAAGATCTCGAAGAAAGACGACAGCGGACAGCGACGTATC
ACGACGAGGATCGTTAGGAAGGTGACGACGCTGACCCGCGGTGAGGAGAAGGCGTCCGTT
GAGGATGTCAGAGGAAGGGAGGTTCATAGATCGGCTGAACGCTATAGACATGTTGAGATG
GAGTCATCGCTTCCTAGGAAAGTCAAGATATCTGACATAGTAGTCGGTCAAGAGCCTAAT
ATGACGGCTCGTGAGGCGCTGCTCAGTTGGGCGAGGCGCTCCACAGCCAAATACCCTGGC
GTAAGGGTCGCTGATTTCACGTCCTCCTGGAGGGATGGACTGGCGTTCAACGCGCTCATA
CACAGGAACCGTCCTGATCTGATTGACTGGCGTAATATCAGATCAAGACAGGTCCGCGAG
CGTTTGGAGACAGCCTTCCACGTGGTGGAGAAGGAGTATGGAGTCACCAGGCTTTTGGAC
CCTGAAGACGTGGATACCCACGAGCCCGATGAGAAGTCCCTGATAACCTACATCTCATCG
TTGTACGAGACATTCCCGGAGCCCCCGGCGGTGCACCCCCTGTTCGACGCGGAGTCCCAG
CGCCGCGCCGCCGCTTACACCGAACTAGCGGCACAGCACCGCGCCTGGCTTCATGAGAAA
TGCTCCTTAATGCAGGATCGTGCTTTCCCGTCAACTTTGATTGAAATGAAAAAGTTGCTT
AGCGAGAGCACCCGCTTCAGAAACGAGGAGGTTCCTCTCAGACAGAGAGAGAAACAGAAG
CTGTTCCACCAGTACAGGGAACTTGAGAAATACTTCGAATCAGTGGGTGAGATTGAAATA
GAACCGACGTTGCGCCCTGAAGCGCTGGAGCAGTCCTGGGCGAGACTGTTGATGGCGGCC
CAAGAAAGGGAGCGTGATTTATCAGATGAGATACGACGTCTCGAGCGCTTACAGCGCTTG
GCAGAAAAACTACACAGGGATATCAAACAGACGGAGGGCGGTCTGGACAACGTGGAGCGT
CATATAGAGAGCGAGATACGACGCGTCGAGCGAGGAGTACATCCGGCGGAAGCGAAACAG
GCCGCGGAACAGATAGAACAAGAACTGAGGACCATGGAACAGGACATACAGGAGATGTTC
CAGGACGCGCAGGCCTTGAGGGACGGACGATATCCGCAGGCCACCGATCTACATAGACGC
GTTCAACAGCTACATGAGAGGTGGGTGAACGCCCGTCAATCCTTCACGGGTCGTCTTGTG
CCCCGTCTGTCGTCTGTTCGTCTTCCGGTCCAGCAGACCACTGTCCGCCGAGAAACACGC
ACGGTCCTGGAAACCAGGGTCCATGACGCCGATCCCAAGTTCCAGCAGTTAAACGACGCC
ACTAGGTGGTGCAAGGAAAAATTGTTCCACTCCAAGGTGGAGCAGTACGTGTATAACAGG
AACAACTTCTCTGGCGACGAGTTGAACTTGTACAACCAACACCTCAACCAGCTGCAGAAA
CTGTACGCTGAGCTGCTCTCCACGAGCACGAAACGTCTGTCCGAGTTGGACGCACTGCAG
GAGTTCCTCCAATCAGCGACCGCGGAACTGAACTGGCTATCAGAGAAGGAACAGGTGGAG
CTGGCGAGGGACTGGGCCGATCCTCACATCAACCTCCCGGCTGTACAGCATTACTACGAG
CAACTGATGTCGTCGTTGGAAAAGAGGGAGCTGCAATTCAGTAACGTGATAGACCGCGGG
GAGGCGCTCATAGCACAACATCACCCTGCCACGAAAACAATTGAATCACATTTACAGGTG
ATGCAATCTCAATGGGCGTGGGTGTTGCAATTGACTCTCTGCCTGGAAACACACCTGAAA
CACACGACGCACTACCACGGCTTCTTCGAGCAAATCAAGGAAGCCGAGAAGTGGATACAG
AAACGAGAAGAAGCTCTAAACACGACATTCTCCCAGTCGGAGTTCACGTTGGACCAGGGC
GAGCGACTGTTGAAGGGTATGCAGGATGTGAGGGAAGAGCTGAACAGTCAGGGAGCCGTA
GTGTCCCGGATGGTGGAGGAGGCGCAGGAGGTGCGGCCTCTCAAACAGAGGAGGGCGCCC
GTCACCAGACCACTCAGGGCTGAGACCGTGTGCGCCTATAAACACGCCAATGTGGCAATA
GAGAAGGGGTCAGCGGTGACAGTTGTGGACAACTCGGGCCGCAGTCGTTGGCGTGTTCGT
CTAGGAGGAGCTGGTACTGAGGTGACGCTGCCTGGAGCGGTACTGGCGCTGCCGCCGCCA
TGTCAGGAGGCGTTGGACGCCGCCGCCGGTCTGAGGAGCGCCTACGACCGGGTCATCCAG
CTATGGCAGAGGAAACAGCTGAGGATGAGGCAGAACATGATCTTCGCTACCATCAAGGTC
GTCAAGGGTTGGGACTTCCCGCAGTTCGTGGCGATGGGTGCCGAACAGCGTCAGGCCATC
CGACGAGCTCTGAACGAGGACGCCGAGAAGTTACTGGCGGAAGGAGACAGAGCCGACCCT
CAGCTCAGGAGGTTACGGAGGGAGATCGATGACGTCAACAGGCTCTTCGATGAGTTCGAG
AGACGAGCCAGGGCTGAAGAGGATTCAAAGAATGCAGCTCGCATCTTTACGGAGCAGTCG
TCACAGCTGCTGGAGCGGCTGGAAACGCTGGAGCGTACGCTGCACGAGCGTATAGCTGCG
CCCGTACCGAGAGATCTCGATGCGCTGGAACACCTGGTGCTGCAACATAGAGACTGGGAG
ACGGCATTGAGAGCGCTGGATGGAGACGTAGACACTGTTCAGAGCACCTTCAGAGGTATA
GCTCTCAAGACACCGGCCATGAAAAAGAATCTCGACAAAGTCATGGGCAAATGGAACGAA
CTACAATCCAAGAGCCAGCTGTTCGTAGAAAGACTTAAGTTCGTCGAGATAGTCGTGAAC
AGCATGGAAGAGAACAATCAAACGATATCAGAATTCGAAATAAAACTGGCGCAGTTCAGC
GACCTGCCCAATGATGTCGAACTGCTTAAAGACATACACGAAGACCTGCTGCGTATGCAG
GTTGCTGTCTCTAAGCAACAGGTGCAGGTGGATCAGATGAATGACGACGCTGAGAACTGC
CGCCGACTAGTGGAGACCTCCAGGGCTGGACTGGGACACTCGCTCCCAAGAGCTGGAAGA
CACGCAGACCTGGAACGCCTGGACAAGGAGGTCACCCAACTGAACCAGAGGTGGAGCAGC
GTCTGCTCACAACTAGCTGAACGTCTACGCAGCTGCGAGGCGGCCTACCAACTTCTACGT
ACATACAACGCTGGTCTTGTCAAGGAGACGGATTGGGTTGACCACGCGACCGCGCAGATG
CAGGCCACGCCTGTGAATGAGGCGCGGGCCAGGGAACACCTGGAGCCGACCAGGAATCTT
TTCACGACTGTGGTGGAAAGGACGCCGAAGATCGAAAAGGTTAACGTAGACGGAGGAAGG
TTCATACGAGAGGCGAAGATCAACTCGTCGAGATGCCAGCGTTATGTGGACTGGCTCTGC
GAGGAGGTTCATCCTTCGTTGGACGCGAGGCAGCTCAAGCGGCAGGCGGACATGGAACTG
GCCGAACGCCTCCGGAGCCGCGGCTCGGATGTAGTGCCAGCGGAAGCGATCCCCACCGGC
GCCGAGACCGTCGCCAGAGAACTGGACGAGCTGAACGCGAAGCACCAGCGACTGTTGGAC
TCCTTGTATGAGAGGCTGAGACGGATCGCGGCTGCCAACCCTGGAGATATCGTCACATTG
CTTGCGATACTCGTGAGATCTCATTCTTTTAAAGCACCTGTTTCCCGTTAA
Protein sequence:
MSMYRFVKEGSSKRLFVQGTLESDESKPLKSSLKKPAPSPVGSPITTSLNLASVPRSLRD
SLTRNETVYDGNYPGMERTSYRSGSYREESYNGRIVHDGNQTHFEYDGDSALAVPLSAGG
RGLSELQEIHTNKRLSTEVLGSSLESTKISKKDDSGQRRITTRIVRKVTTLTRGEEKASV
EDVRGREVHRSAERYRHVEMESSLPRKVKISDIVVGQEPNMTAREALLSWARRSTAKYPG
VRVADFTSSWRDGLAFNALIHRNRPDLIDWRNIRSRQVRERLETAFHVVEKEYGVTRLLD
PEDVDTHEPDEKSLITYISSLYETFPEPPAVHPLFDAESQRRAAAYTELAAQHRAWLHEK
CSLMQDRAFPSTLIEMKKLLSESTRFRNEEVPLRQREKQKLFHQYRELEKYFESVGEIEI
EPTLRPEALEQSWARLLMAAQERERDLSDEIRRLERLQRLAEKLHRDIKQTEGGLDNVER
HIESEIRRVERGVHPAEAKQAAEQIEQELRTMEQDIQEMFQDAQALRDGRYPQATDLHRR
VQQLHERWVNARQSFTGRLVPRLSSVRLPVQQTTVRRETRTVLETRVHDADPKFQQLNDA
TRWCKEKLFHSKVEQYVYNRNNFSGDELNLYNQHLNQLQKLYAELLSTSTKRLSELDALQ
EFLQSATAELNWLSEKEQVELARDWADPHINLPAVQHYYEQLMSSLEKRELQFSNVIDRG
EALIAQHHPATKTIESHLQVMQSQWAWVLQLTLCLETHLKHTTHYHGFFEQIKEAEKWIQ
KREEALNTTFSQSEFTLDQGERLLKGMQDVREELNSQGAVVSRMVEEAQEVRPLKQRRAP
VTRPLRAETVCAYKHANVAIEKGSAVTVVDNSGRSRWRVRLGGAGTEVTLPGAVLALPPP
CQEALDAAAGLRSAYDRVIQLWQRKQLRMRQNMIFATIKVVKGWDFPQFVAMGAEQRQAI
RRALNEDAEKLLAEGDRADPQLRRLRREIDDVNRLFDEFERRARAEEDSKNAARIFTEQS
SQLLERLETLERTLHERIAAPVPRDLDALEHLVLQHRDWETALRALDGDVDTVQSTFRGI
ALKTPAMKKNLDKVMGKWNELQSKSQLFVERLKFVEIVVNSMEENNQTISEFEIKLAQFS
DLPNDVELLKDIHEDLLRMQVAVSKQQVQVDQMNDDAENCRRLVETSRAGLGHSLPRAGR
HADLERLDKEVTQLNQRWSSVCSQLAERLRSCEAAYQLLRTYNAGLVKETDWVDHATAQM
QATPVNEARAREHLEPTRNLFTTVVERTPKIEKVNVDGGRFIREAKINSSRCQRYVDWLC
EEVHPSLDARQLKRQADMELAERLRSRGSDVVPAEAIPTGAETVARELDELNAKHQRLLD
SLYERLRRIAAANPGDIVTLLAILVRSHSFKAPVSR