New model in OGS2.0 | DPOGS201695  |
---|---|
Genomic Position | scaffold1081:+ 14100-17888 |
See gene structure | |
CDS Length | 1017 |
Paired RNAseq reads   | 3 |
Single RNAseq reads   | 15 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010793 (5e-119) |
Best Drosophila hit   | CG18208 (5e-57) |
Best Human hit | alpha-2B adrenergic receptor (1e-19) |
Best NR hit (blastp)   | PREDICTED: similar to CG18208 CG18208-PA [Tribolium castaneum] (3e-113) |
Best NR hit (blastx)   | PREDICTED: similar to CG18208 CG18208-PA [Tribolium castaneum] (1e-85) |
GeneOntology terms    | GO:0004938 alpha2-adrenergic receptor activity GO:0016021 integral to membrane GO:0007186 G-protein coupled receptor protein signaling pathway |
InterPro families    | IPR000276 GPCR, rhodopsin-like, 7TM IPR017452 GPCR, rhodopsin-like superfamily |
Orthology group | MCL10877 |
Nucleotide sequence:
ATGTCTCTCTATTGTCTACAGGTGTCAGACGACATCGGCTATGTGGTTTATTCAGCTCTG
GGTAGCTTCTACATCCCATCATGCATCATGGTGTTCGTTTACATAAGAATATACTACGCT
GCAAAGGCGCGAGCGAGAAGAGGTATAAGAAAAAATCCGCGACCACGGCCGAATGAACAG
CAGACGAGCTTTTCAAACGCGCCGAAAGGCACGCGACCTATGCCGACGTCATCCTCGCTG
TCAATGCCGCCCGGTGTAGATGCCAGTAATTCTAATAATAATAGAGAAGGTCAGATATCT
ACTATCGAGACACAACAAGTCGCGATACCAACGGTTACCTGTGACTTCGCCTCTGATATA
TCTACCAGCGAGGCAGGAGACGGTGCTGCCATCGATGACAGAAAGGACACATTAAAGGTG
GTAACAGCGGCTCAAGTAACGAGAAATCCTCTCGCGGCATGCCCATACAGGAGTTCGACG
TTATCTGTGAATGGAGAATTACAACTCCAAGCACAAAGAGGCCGAGCTCCCAGCGTCGCA
ATAGATACAGACATGGTATCAGAATTAGAGCCTTCATCATCCGACTCGGGTGTCGTTTCC
CGTTGTGCTGTTGTTAAACCCCTTAAGCTAAGAATATGTCAGCCGATATTCGGCAAGAAA
CACGAATCCTCTCGAAGACAGGAAAAAGCACAGCCAACTAAAGCAGAACTTGAACCAGCG
CTACCAAAACAGCACAAGCCAAGGGATCCAGAACGAGAGAAAAGAAGATTAGCTAGAAAG
AAAGAAAAAAGGGCGACGTTAATATTAGGTTTAATTATGGGCAGCTTCATAGCTTGCTGG
TTGCCATTTTTCTTCCTTTATATTTTAAAAGCAGCTTGCAGGAGTTGTATGATACCGGCT
AGTGCGTTCGCGATTGCTTTCTGGCTGGGTTATATGAACTCTGTGCTGAACCCTGTCATA
TATACAATATTTAACAAGGATTTCAGAAGAGCGTTTAGACGTATACTGTTCAAGTGA
Protein sequence:
MSLYCLQVSDDIGYVVYSALGSFYIPSCIMVFVYIRIYYAAKARARRGIRKNPRPRPNEQ
QTSFSNAPKGTRPMPTSSSLSMPPGVDASNSNNNREGQISTIETQQVAIPTVTCDFASDI
STSEAGDGAAIDDRKDTLKVVTAAQVTRNPLAACPYRSSTLSVNGELQLQAQRGRAPSVA
IDTDMVSELEPSSSDSGVVSRCAVVKPLKLRICQPIFGKKHESSRRQEKAQPTKAELEPA
LPKQHKPRDPEREKRRLARKKEKRATLILGLIMGSFIACWLPFFFLYILKAACRSCMIPA
SAFAIAFWLGYMNSVLNPVIYTIFNKDFRRAFRRILFK