New model in OGS2.0 | DPOGS215544  |
---|---|
Genomic Position | scaffold4943:- 12302-20349 |
See gene structure | |
CDS Length | 3000 |
Paired RNAseq reads   | 5474 |
Single RNAseq reads   | 12313 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002300 (0.0) |
Best Drosophila hit   | CG6051 (1e-73) |
Best Human hit | lateral signaling target protein 2 homolog isoform 1 (3e-63) |
Best NR hit (blastp)   | PREDICTED: similar to CG6051 CG6051-PB [Tribolium castaneum] (1e-90) |
Best NR hit (blastx)   | PREDICTED: similar to CG6051 CG6051-PB [Tribolium castaneum] (2e-79) |
GeneOntology terms   | GO:0008270 zinc ion binding |
InterPro families    | IPR017455 Zinc finger, FYVE-related IPR013083 Zinc finger, RING/FYVE/PHD-type IPR000306 Zinc finger, FYVE-type IPR011011 Zinc finger, FYVE/PHD-type |
Orthology group | MCL14925 |
Nucleotide sequence:
ATGGACCAGGTTCTCGGAGATGAGAGAGTCGCTCGCGGCTTCCGAGTTAAATTCCCGGAG
GACGTGCTGCAGGATAATCTGGCTGGTCAGCTTTGGTTTGGGGCCGAGTGCCTGGCAGCT
GGGTCGTCTATAATGAATCGGGAGGAAGAATCAGCCGCTATGAGACCGTTAGCTAAGGCT
TTGACCAGAAGCCTGGAGACCGTGAGGTCTTTGCTCAGAGAACAGTGTCTCCGCCCACGT
GGTCTGGCCCTACAAGATCATGACGACATGCTCCACGAGAGTTTGAGGATATTTGACAGA
TTGTTCGCTGAATTCGAGCTATGTTACGTGAGCGCGATGGTAAATGTCAAGACTCCACAC
GAATTTGAAGCCCAGCAGTTGATATGTGTCCTGTTCTCTGAGAGTCTAGGACGAGCTCTC
AAACAAAGTCTGCTTACACAGGAACAGGTGGATTCATATGATCCAGCGCTAATGTTCGCC
GTTCCACGTCTCGCTATAGTCAGCGGCCTCTTGATATATTCCAGCGGACCTCTCAGTATA
GACAAACCACCTGAAGAAATGTCCGACATGTTCCGTCCCTTTCGCACCCTGCTTCACAAA
ATTCGCTCTCTTCTTTGGACTTTGGATCGGCGGGAGCTACTTGTGCTTGAGCGATTGTTA
TGTACCAACGAAGACGTAGCCAGTCTCGCCGGGCTTGATATACCCGCTGATGATTCCACA
GCTGATTCATGTTATCCTGATATTGGCGAGTTCGTGTCTAAATTCTACGCGGATAACGTG
CACTGCCGGGATCTATACACCCAGAGTTCAAGCGAACATTTGATAACAGACGCCGATTAC
CTTCCCGACAACATTGAGGTTATGACTCCAATTATTGAAGGACTAAAACGTCTCACAGAG
GATATCGATGAATCTGAACGAGAATCCATCGATATCGACAATAAACTCACGGATAAGGAC
AGCACTAGCACTGATACATTCCAGTCGACAGAGAGCAAAGAATTTGATAAAATGCGGAAG
ATTAGTAGGGCGGAAAGTGATTTATCGTCGCTGAGAAATCTATCGACGAATGGTCTCATG
ATGTTCGATCCATTGGTTATAAATGCGGTGTCAGCATCGACATCAGAACGACAAATCCCG
GACCAAGATTTAGTCACATCACTAAACGAGCAAGTAACTGAAATAGCGGATAGATTATCC
TCTATAGTTAGTGATGTGGATATACACGATCACCAAATACACTCGTTCTCAACAAACGAT
GTCCCATCCTTGATATCGAATGAGAATTCTGAGGATTACGGCTTTAGTGGTCCAAGGAAC
GAACAGTTGAGTTGTATGCCATCCACTAGTCATGGTTATTTGATACCAAACGCTATTAGT
CAGGAGCCCGTAGTACTAGCCTCACTCTCACACAATAACTCCGCTGTGTTCAACCAGGAC
GAAAGCACTGATATTAACGGCGCAATACTGAACTCTGATCTCCCATTAATACTGACCGAT
AATATTGACGCTGATATTGTAAATACTAATATATCAATAGCAAACGTGAATCTTAGTTCA
CTGTTGTTGACGAACGAGGAATTCAGACAGAATTTCATTGGAAACGAAAATGACGGTGAC
AATACAAGCTTCCATTCAGCAAAAATGACGATGGATAAAGATGAAAGGGTCAAATTTATG
CTCGGCTACGACAGCGAGCACGAGTCACCAGCCGATTCTGGTGTCAGTACTGAAAATACA
AGCCTAGACAGATCGCCTGACACGGACCAGAATAAAGATATCAAATCAAACTATTTCATG
CAACAGAACAGGGTATTAAAAAGTCCAATAGACGAGCGGTTACAGAAAGAAAACGTTCTA
GAAAGTTCCTTCTCTGATGTAAGAGACGATGTTAATATAAATTACGTTGAAGATGACACA
CAGAAGAATGAGGCGTCGTCTAGCGTTATTGATAGGTTGAGTGACGACGGCTTGAACGAA
GCTACTAATGTTAATGTACAGAACTGGACCACAAATGAACCGCAAGACGAAATAAGGACC
ATAGAGGATGTTATAACAGGCCTTAGAAGACACAGAGAAGCCGATAAGAAGAATACGTTA
GAGGGAACGAACGAACCGAACTGTTCCACGAGCACCAGGCGGAAAAGGAAATCGAGCACC
AAGAAGAAAAAGAAAAAGATGTGGTCGCCCGGCATCGTTATACTCGATAACAGATCAAAC
CAAAACCAAAGTCCCTTAAAGTTGAACCTGGATCACTTTGTCGAGAATACATCTTGCAGT
ACGTCCGAGTGCGCTGACGACGAGCAGATCGCCCTCGCGCTTCAAGCACAGGAACTAGCA
GCAAGAAGACGGGCCAGGGATAAATTCAAGTCATCCGAGGATCTGATACATCGTCTGTTC
GTGTGTATAGCCGGGGTGGCTGATCAGTTGCAGACTAACTTCGCAGCGGATCTACGTAAC
ATATTGAAGGCTGTTTTCCTCATTAACCAGACGGCGGATGTGCCAGAGAGCATAGAGTAC
CAGGCCGGGGAGGATCAGGTCATACAAAACGGAAGTTCCTTCGACAGCGTTTATTCAGCG
GAGGAAGTGTACGCGGACAGTAACTCCGACTCTACATCAGAGCCATCTAGAGTAGCAAGA
CGTAACACAGTCAACTCTACCATGAACGAGCCTAACGTTAGCGATAGACGTAAATCAGCG
GACACCATGCAAGCCTCTGTGTCAACTGGAGATCTTACATATAGGGATGACACGTCTTCG
TCGTCAGTCGTGGAGCGAGCGCCCGAGTGGGTCCCTGATATAGCGGCGCCGGCCTGTATG
AGATGCTCCTCACACTTCACAGCCTTCAGGCGTAGACATCACTGTAGGAACTGTGGTAAA
GTATTCTGTGCTTCGTGCAGTTCGAATTCAATACCATTACCGAGGTTTGGTCAGTTGAAG
CCGGTGCGTGTGTGTGAGGAGTGCTACCAGACCAACTGTGGGAGACAGACGAATCGGTGA
Protein sequence:
MDQVLGDERVARGFRVKFPEDVLQDNLAGQLWFGAECLAAGSSIMNREEESAAMRPLAKA
LTRSLETVRSLLREQCLRPRGLALQDHDDMLHESLRIFDRLFAEFELCYVSAMVNVKTPH
EFEAQQLICVLFSESLGRALKQSLLTQEQVDSYDPALMFAVPRLAIVSGLLIYSSGPLSI
DKPPEEMSDMFRPFRTLLHKIRSLLWTLDRRELLVLERLLCTNEDVASLAGLDIPADDST
ADSCYPDIGEFVSKFYADNVHCRDLYTQSSSEHLITDADYLPDNIEVMTPIIEGLKRLTE
DIDESERESIDIDNKLTDKDSTSTDTFQSTESKEFDKMRKISRAESDLSSLRNLSTNGLM
MFDPLVINAVSASTSERQIPDQDLVTSLNEQVTEIADRLSSIVSDVDIHDHQIHSFSTND
VPSLISNENSEDYGFSGPRNEQLSCMPSTSHGYLIPNAISQEPVVLASLSHNNSAVFNQD
ESTDINGAILNSDLPLILTDNIDADIVNTNISIANVNLSSLLLTNEEFRQNFIGNENDGD
NTSFHSAKMTMDKDERVKFMLGYDSEHESPADSGVSTENTSLDRSPDTDQNKDIKSNYFM
QQNRVLKSPIDERLQKENVLESSFSDVRDDVNINYVEDDTQKNEASSSVIDRLSDDGLNE
ATNVNVQNWTTNEPQDEIRTIEDVITGLRRHREADKKNTLEGTNEPNCSTSTRRKRKSST
KKKKKKMWSPGIVILDNRSNQNQSPLKLNLDHFVENTSCSTSECADDEQIALALQAQELA
ARRRARDKFKSSEDLIHRLFVCIAGVADQLQTNFAADLRNILKAVFLINQTADVPESIEY
QAGEDQVIQNGSSFDSVYSAEEVYADSNSDSTSEPSRVARRNTVNSTMNEPNVSDRRKSA
DTMQASVSTGDLTYRDDTSSSSVVERAPEWVPDIAAPACMRCSSHFTAFRRRHHCRNCGK
VFCASCSSNSIPLPRFGQLKPVRVCEECYQTNCGRQTNR