| New model in OGS2.0 | DPOGS208922 |
|---|---|
| Genomic Position | scaffold31:- 229226-231720 |
| See gene structure | |
| CDS Length | 1596 |
| Paired RNAseq reads | 11 |
| Single RNAseq reads | 98 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002497 (2e-65) |
| Best Drosophila hit | ND |
| Best Human hit | putative malate dehydrogenase 1B (2e-15) |
| Best NR hit (blastp) | hypothetical protein Phum_PHUM259850 [Pediculus humanus corporis] (6e-55) |
| Best NR hit (blastx) | hypothetical protein Phum_PHUM259850 [Pediculus humanus corporis] (4e-53) |
| GeneOntology terms | GO:0016615 malate dehydrogenase activity GO:0006108 malate metabolic process GO:0006099 tricarboxylic acid cycle GO:0005975 carbohydrate metabolic process GO:0055114 oxidation reduction GO:0005488 binding GO:0016491 oxidoreductase activity |
| InterPro families | IPR010945 Malate dehydrogenase, type 2 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal |
| Orthology group | MCL18050 |
Nucleotide sequence:
ATGGTTTTCCGCATTGTAATCGCGGGAGAGTCACAATGTAATATTTTTGCTGAAGTGTGT
TTGGTAGCTGACCATATTTCTCAAAATTTGCCTAGCTTTTGTTACGAACGCATAGAAAAA
CCAGTAGCTGAATGGAAGCTTTGGTTGTGTAAAATAAACCAAAAAAACAAGTGGCATCAT
ATAGATTCTCCAATAATATGGAAAGAGCTGTTGATGATGGGCAGCAAGCCATTTTATATT
GGTGGCGCTTGTGAATTTTTGGAATATTGTCATTCATATTATAATTTTGATCTCTTTTTG
TCTCCAACGAGATTTGAACATTTGGTATATAATTACGGACAATATCAAAGGAAAATTAAA
CAAGAAAAAAGATTGAACTCGTCATCACAAATTTTCGACTACCAAAATGATGTTAAAAAG
TCTGATTACACAATTTGCATATCTGGTGCAGGGAATCCGATATCTATGTTTATAATATCT
GGTTTATTTGAATTGACATCTGGTGATAAAATAATTTCTAAAATATATATTTACGATGAC
GATTGCTCTCAAAGTTTCATGGATTTTATTGAATATGAATGTAATTTCCTCGGTGGCGAT
CTTTCAAGCAAAGTTGTTAAAAATATCGAAAAGATTGGCGTTGCTCTTACCGGGACCAAT
CTTTTAATAATCTTAGACTATGTACCTTTTAGATCTACTTATTCTATTGGAAAATGGCTA
TATGAAAATAAGAAAGTTATGGAAAGAATTGCTTTAAATATTAATGCATCAGCGTCCCAG
AAAATGTATATTGTTTTCCCTAATCTAGGACCTGCATGTTATAATGCCACTGTTTTAGCA
AATGCTGTAAAGAGTTTGCCTAGGAGTAATATTGTAGTCGTTACGTCGGATATTGGTTTA
GATATAGTTCCAGTGGCTGCCGAAATAGCCGATGTTCCTCTTAAGAACATATTTTGTCCA
CCAGTCTGGGGGTTTGTAGGAATAAATCATTTAGCAGATATTCATACGACTATTCACAAA
TACGAGTCTTTCGATCCCTATAATAGATTTATCAAAGTTAGAAACTCAACACTTTGCGTT
GGTACGCTTACACCGGAATTGCGATCAATGGAATACCTCATGTTTTCAGATGATACTTTG
TGGACAAAAGTTGCTGAACGAAAAATCCAAAAGAAGTTGTCTGAAAGACCAATTTGTATA
AATAAAGCAGTTGCTGTTTTAAATTTGGTAAAGTTATGGCTTTTTTATCCTGATCCCAAA
AATGTTGTTAACCTAGGTATTCCATGCAATGGTGCTTTTGGCTTAACATTTGGAGGACAT
TTTTCACAGCCTGCAAACTTAGTTAATGGAAAGTGGGAACCAGCTTCGAATTATGCATTA
CCAAGAGATCCAAATATGTCAATTTCGTATTTGGAAGAAATAGCAAAATTGTGGAGTGTT
GTGATGCGGCTGTGGGACATGTGGGGTGCTCTCTGGACCGTCGAGGCTCTGGTTCTGTTC
CTGGGGGTTCTTGCGACGCCTTTGGATCCTGTGCCACAAAGTTTGGGAGGTGAGAGAAGA
CTCTATTACTCCTACGCGCTCTTTTTTTCGAAGTAA
Protein sequence:
MVFRIVIAGESQCNIFAEVCLVADHISQNLPSFCYERIEKPVAEWKLWLCKINQKNKWHH
IDSPIIWKELLMMGSKPFYIGGACEFLEYCHSYYNFDLFLSPTRFEHLVYNYGQYQRKIK
QEKRLNSSSQIFDYQNDVKKSDYTICISGAGNPISMFIISGLFELTSGDKIISKIYIYDD
DCSQSFMDFIEYECNFLGGDLSSKVVKNIEKIGVALTGTNLLIILDYVPFRSTYSIGKWL
YENKKVMERIALNINASASQKMYIVFPNLGPACYNATVLANAVKSLPRSNIVVVTSDIGL
DIVPVAAEIADVPLKNIFCPPVWGFVGINHLADIHTTIHKYESFDPYNRFIKVRNSTLCV
GTLTPELRSMEYLMFSDDTLWTKVAERKIQKKLSERPICINKAVAVLNLVKLWLFYPDPK
NVVNLGIPCNGAFGLTFGGHFSQPANLVNGKWEPASNYALPRDPNMSISYLEEIAKLWSV
VMRLWDMWGALWTVEALVLFLGVLATPLDPVPQSLGGERRLYYSYALFFSK