| New model in OGS2.0 | DPOGS215399 |
|---|---|
| Genomic Position | scaffold2795:+ 8351-12505 |
| See gene structure | |
| CDS Length | 900 |
| Paired RNAseq reads | 27 |
| Single RNAseq reads | 82 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012432 (2e-104) |
| Best Drosophila hit | CG10026, isoform B (3e-31) |
| Best Human hit | clavesin-2 (1e-22) |
| Best NR hit (blastp) | PREDICTED: similar to CRAL/TRIO domain-containing protein [Nasonia vitripennis] (2e-50) |
| Best NR hit (blastx) | PREDICTED: similar to CRAL/TRIO domain-containing protein [Nasonia vitripennis] (9e-51) |
| GeneOntology terms | GO:0008431 vitamin E binding GO:0016918 retinal binding GO:0006810 transport GO:0005622 intracellular GO:0005215 transporter activity |
| InterPro families | IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR011074 Phosphatidylinositol transfer protein-like, N-terminal |
| Orthology group | MCL40748 |
Nucleotide sequence:
ATGCCGTTCATAGACATAGCGTTCCAGGCTGAAGTCAGCAGGTTTGAGGACCAGGAGTTC
GAGGAGTGCGCCAGGAGGAACTGCTCCGAGGACCCAGAGACCAGGCAGACAGCCATTCAC
AACCTACGGAACCTTATATACCAACGTGGTGAGTGTAATCCGAGAAGACTAGACGACGCG
TACCTCCTGCGATTCCTGAGATGCAGGAGATTCATACCAGCTCTGGCACACAAACTGATT
GTCCGATACGAAGAGTTCCGTCGCAAGAACTCCTACTTGTATGACTGCAAGGCCTTCGGT
CTCCAGAAGGTGAAGGGGGTATACGGAGGCACCCTGCCGGAGAGTCCGCACCACGGCAGG
ATCACACTCATGAGGTTCGGTCGTTGGGACACGGAAGCCGTCCCCGTGGTGGACGTGGTC
CGTTGCGCTCTGCTGATGGACGAGATCGCGGTCATGCAGCCCAAATTACAAATCCTAGGC
GTCACCATCATAGTCGACCTCGAGGGTCTCAGTGTGAGACATGTCAGACACCTCACACCC
ACTATAGCGCATCAGATCGTCAGCCTCATGGGGGTGTCCTTCCCCCTGCTGCTGCACGGC
CTCCATATAGTCCGCTACAACTGGATCCTGAACACTTTCTTCTACGTGTTCAAGCAGTTC
ATACCGACTGCGGCCTGGGAGAGGGTCCATTTCCACGGACACGACATGGCCTCCCTCCAC
AGACACATACCCCCCGAGTACCTCCCGCCGGAGTACGGGGGCTGCTGCCCTCACGTGGTG
GAGGTCGACGAGTGGGTCAGGAAGGTCGACAGGTTCAAGGACGACTTCATGGTCAACGAG
CTCAGGGAGCTGGGCTTCACCGTCGACGATCAGCAGTATAATAAATTATATGAAATATGA
Protein sequence:
MPFIDIAFQAEVSRFEDQEFEECARRNCSEDPETRQTAIHNLRNLIYQRGECNPRRLDDA
YLLRFLRCRRFIPALAHKLIVRYEEFRRKNSYLYDCKAFGLQKVKGVYGGTLPESPHHGR
ITLMRFGRWDTEAVPVVDVVRCALLMDEIAVMQPKLQILGVTIIVDLEGLSVRHVRHLTP
TIAHQIVSLMGVSFPLLLHGLHIVRYNWILNTFFYVFKQFIPTAAWERVHFHGHDMASLH
RHIPPEYLPPEYGGCCPHVVEVDEWVRKVDRFKDDFMVNELRELGFTVDDQQYNKLYEI