New model in OGS2.0 | DPOGS210219  |
---|---|
Genomic Position | scaffold457:- 8890-9552 |
See gene structure | |
CDS Length | 489 |
Paired RNAseq reads   | 52 |
Single RNAseq reads   | 259 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002546 (5e-34) |
Best Drosophila hit   | CG31278 (3e-41) |
Best Human hit | peptide deformylase, mitochondrial precursor (3e-25) |
Best NR hit (blastp)   | GI23900 [Drosophila mojavensis] (8e-47) |
Best NR hit (blastx)   | GI23900 [Drosophila mojavensis] (3e-44) |
GeneOntology terms    | GO:0042586 peptide deformylase activity GO:0006412 translation GO:0005506 iron ion binding |
InterPro families   | IPR000181 Formylmethionine deformylase |
Orthology group | MCL16183 |
Nucleotide sequence:
ATGGTCGTGCAAGCTCTCAAGTATGTATTATATAAATATGGAAGTGTGGGAATGGCGGCC
CCACAGATAGGAGTCAATATGAGGGTAATTGTTTTGAGACATACAGAGAAACAAATAGCT
TCACTATCTTCTGAATTGATTAAACAGCGCCAAATCAGTGCTGTTCCGCTCACTGTATTC
ATCAACCCCATACTCAAAGTGGTTGATTACCAAAAAGTTATTCATCCCGAGGCTTGTGAA
AGTGTCAGAGCGTTTTCAGCAGATGTTGCTAGATATAAAGAAGTGCAGGTGTCGGGTTAT
GATGAAGAAGGCGAGGCAATATCTAAAGTATTTAAAGGTTGGGGAGCAAGGATAGCTCAG
CATGAAATGGATCATTTAGACGGCAAGCTGTACACTGACATAATGGATAGGAAGACACTG
CTGTGTTCATGCTGGGAAGAAGTTAACTTATCAAAAGGAAAAGTTGCAATTCCTTTTAGT
CCTGAGTGA
Protein sequence:
MVVQALKYVLYKYGSVGMAAPQIGVNMRVIVLRHTEKQIASLSSELIKQRQISAVPLTVF
INPILKVVDYQKVIHPEACESVRAFSADVARYKEVQVSGYDEEGEAISKVFKGWGARIAQ
HEMDHLDGKLYTDIMDRKTLLCSCWEEVNLSKGKVAIPFSPE