New model in OGS2.0 | DPOGS210246  |
---|---|
Genomic Position | scaffold457:+ 91184-94489 |
See gene structure | |
CDS Length | 1428 |
Paired RNAseq reads   | 857 |
Single RNAseq reads   | 2235 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002379 (6e-136) |
Best Drosophila hit   | CG12042 (2e-101) |
Best Human hit | dynactin subunit 4 isoform b (4e-86) |
Best NR hit (blastp)   | GJ20263 [Drosophila virilis] (4e-112) |
Best NR hit (blastx)   | PREDICTED: similar to dynactin P62 subunit [Tribolium castaneum] (1e-112) |
GeneOntology terms    | GO:0007018 microtubule-based movement GO:0005869 dynactin complex |
InterPro families   | IPR008603 Dynactin p62 |
Orthology group | MCL12934 |
Nucleotide sequence:
ATGGCTTATTTAACTCAGCCAGATTATGTTAAGTATATATGTTCCTGTGGACAACTTAAA
CCTATCACTAACTTATATTTCTGTCGGCATTGCTTAAAAATACGTTGCGGTTTTTGCATC
TGCCATGAAGTGGACTCCCATTATTGCGCGAACTGTTTGGAGAACATGCCATCATCGGAG
GCGAGGTTGAAGAAGAATCGCTGCAGTAGTTGCTTTGCCTGTCCCAGTTGTTTCCATACA
CTGTCGACTCGAGCGACCCTCGCCCGGGACCCCGCGGGGGGTGATGGCAAGCCTCCAAAG
AAGATGTACTATTTATCGTGTTTCAACTGTCGCTGGACCTCGCGGGATGTTGGCATACCA
GATCAGCCAGTGGCATCTGGAGGATGGCCGGAAAGAACGAATCCCTTCACGAGTCGGTTC
AACCAACTCCTCGAATACTATAAAGCGATCGCGCAGCAAGAGAAGCAGGAGAAGTTAGAC
AAGGAGAGGAAGAAGTTTGTCACCAGAGGGAAATACATCAATCTCACGGACAAGACTGGT
CTGACGGGAGCCATGGCTAGGAACATAGCCGGGCTACCCTCCAGCGAGAGTTCGTCGACG
GTCATTAGTAATTTCGTGCCGAGCCAAGCCAGCGCGGATGTGGAGGAGCTGCCCGAGGAC
TACCACCTGAAGGAAATCGACTTGAAACAGATAACTCGTATGTCTCAGCGCACGTCGTGT
CCTGAGCTGCAGCCGTCGCTGGCGTCTCGTCTGTCTCCGAGGCCTCGTGCGTTGTGTGTG
AAGCGCAGTCAGCGGTGCCGCGCCTGTGACCATAACCTCACCAAGCCCGAGTACAACCCT
GGATCCGTCAAGTTCAAGATCGAGCTGCTAGCCTTCTACCACGTGCCGGAAGTGAAGATA
ATATCGTACGAAACCATCAAGCCGGGCGGAACATCGGCCCTGCTGTTGAAGTTGTCCAAC
CCGACGGCACACGAGATGACCATCAGGATGCTGCAGCCTGAAGACGTACCGGACACTGAG
GAGGAACACAAGACCATCGAGAAGACACTCGAGAAGTCACTCAGTTTGGAAAAGGACGTA
TCGTGGAACGCTTGTTTCCCTCGGCGACCCCCGCCGTCCCGCGCCGGGTCGGTCGGTCTG
CCCGCCGTTAGCCTCACCCTCGCGCAGAGAGACGACGCCGCGGAGTACGACGACGAGCCG
CCGGGAGATAATGATGATATAATTCTGTGGCGGAAGTCCAACAAGCTGGCTCTGAGGCTG
AAGCTGACTACAGACCCTGAAGCCAGAGTTGGGACGGACGCATATTTCTCATTCGCTATA
CAATACTCGTACAGGAACACTGTGCCGCCCTCCGCCACCGTGGTGCAGCACAGCGACCAC
ACGCTGTACACCACGGTCATACTGGATTTGGGGAAAGTCTGTGAATAA
Protein sequence:
MAYLTQPDYVKYICSCGQLKPITNLYFCRHCLKIRCGFCICHEVDSHYCANCLENMPSSE
ARLKKNRCSSCFACPSCFHTLSTRATLARDPAGGDGKPPKKMYYLSCFNCRWTSRDVGIP
DQPVASGGWPERTNPFTSRFNQLLEYYKAIAQQEKQEKLDKERKKFVTRGKYINLTDKTG
LTGAMARNIAGLPSSESSSTVISNFVPSQASADVEELPEDYHLKEIDLKQITRMSQRTSC
PELQPSLASRLSPRPRALCVKRSQRCRACDHNLTKPEYNPGSVKFKIELLAFYHVPEVKI
ISYETIKPGGTSALLLKLSNPTAHEMTIRMLQPEDVPDTEEEHKTIEKTLEKSLSLEKDV
SWNACFPRRPPPSRAGSVGLPAVSLTLAQRDDAAEYDDEPPGDNDDIILWRKSNKLALRL
KLTTDPEARVGTDAYFSFAIQYSYRNTVPPSATVVQHSDHTLYTTVILDLGKVCE