| New model in OGS2.0 | DPOGS211264 |
|---|---|
| Genomic Position | scaffold3251:- 2774-3699 |
| See gene structure | |
| CDS Length | 522 |
| Paired RNAseq reads | 301 |
| Single RNAseq reads | 1284 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001829 (7e-47) |
| Best Drosophila hit | CG6833 (4e-52) |
| Best Human hit | RNA exonuclease 4 (8e-53) |
| Best NR hit (blastp) | PREDICTED: similar to XPMC2 prevents mitotic catastrophe 2 homolog [Apis mellifera] (4e-58) |
| Best NR hit (blastx) | PREDICTED: similar to XPMC2 prevents mitotic catastrophe 2 homolog [Apis mellifera] (1e-55) |
| GeneOntology terms | GO:0004518 nuclease activity GO:0016787 hydrolase activity GO:0004527 exonuclease activity GO:0005634 nucleus GO:0008150 biological_process GO:0003676 nucleic acid binding GO:0005622 intracellular GO:0005575 cellular_component GO:0003674 molecular_function |
| InterPro families | IPR013520 Exonuclease, RNase T/DNA polymerase III IPR012337 Ribonuclease H-like IPR006055 Exonuclease |
| Orthology group | MCL12379 |
Nucleotide sequence:
ATGGATTGTGAGATGGTCGGTGTTGGTTACGAGGGTAATGACCACATGATAGCTAGGGTA
TCAATAGTCAATAAATTCGGAGACTGCATATACGACAAGTTCGTTAAAGCCAGAGAAGAG
GTAGTGGACTACAGAACCAAAGTTAGTGGCATCAGAAAAGAGGACCTGTTGAACGGAGAA
GAATTTGCAACAGTTCAGAAAGAGGTCTCCGAGCTGATTAAGGGAAAGATACTCGTAGGG
CACTCGTTAAAAAATGATTTAAGTGTGTTATTTCTGTCCCATCCGAAACGTAATATAAGG
GATACATCTAGATACAAACCTTTCCGTAAGATAACCAAAGGCAGCACACCGTCACTGAAA
CGCCTGGCCAAGGAGATACTCGGCATCGACATACAGGACGGCGAGCACAGCTCGGTGGAA
GATGCAAGGGCTGCGATGCAGATATACTGTACTGTACAGAAGAGCTGGGAACAGGCGCTC
AGTGAGAAGCGAGGGTACAGCAGGAAGTTTGTGGAGACATAA
Protein sequence:
MDCEMVGVGYEGNDHMIARVSIVNKFGDCIYDKFVKAREEVVDYRTKVSGIRKEDLLNGE
EFATVQKEVSELIKGKILVGHSLKNDLSVLFLSHPKRNIRDTSRYKPFRKITKGSTPSLK
RLAKEILGIDIQDGEHSSVEDARAAMQIYCTVQKSWEQALSEKRGYSRKFVET