Genomic Position | scaffold7646:- 7062-7985 |
---|---|
See gene structure | |
CDS Length | 924 |
Paired RNAseq reads   | 678 |
Single RNAseq reads   | 1705 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007995 (3e-08) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (8e-162) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (1e-150) |
GeneOntology terms    | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
InterPro families   | IPR000477 Reverse transcriptase |
Orthology group | MCL10012 |
Nucleotide sequence:
ATGTACCGCGATTCCGTTTCAATGGTTAGGACTGCTGTTGGCGATACAAAACCCTTTCCG
ATCTCAGTAGGGGTTCACCAAGGCTCGGCTCTTAGCCCCTTCTTGTTCAATGTAGTGCTG
GACACTGTCTCGGCTAACATCCAGGACCAGCCTCCATGGCTGATGATGTATGCCGATGAC
ATAGCGCTCATTGATGAGAGCAGGTTGACGCTAGAGCGAAGAGTGAACCTCTGGAAGGGT
ACGCTTGAGAACGGTGGTCTTAAACTAAATGTGACGAAGACCGAGTACATGGCTTGCGGA
AGCCCGGACTCTTGCACTATCCATATAGGTCCTGAACCAGCCGTTAAGTCGGAAAAGTTC
AGGTACCTTGGATCTATTCTGCATGAGTCCGGAGGCATCGATCACGATGTCCAAGCCCGG
ATCAGCGCTGCTTGGGCGAAATGGCGTGAGGTCACAGGTGTGGTCTGCGATCGCAGAATA
CCTACCAAGCTCAAGGGAATAATATACAAGAGCATAATCCGACCGGTTCTCTTATATGGA
AGCGAATGTTGGCCAACACTGTCCAGGCACACTCAGGAGCTTCACGTCACGGAGATGAAG
ATGCTGAGGTGGATGTGTGGCGTAACGCGGGCTGACCGTATACGTAACACATTTATCCGA
GGTAGTCTTGGAGTCCGTGACGTAGCGGATAAGCTTCAAGAGAGTCGCCTGAGATGGTAT
GGCCACGTTGCACGCCGGCCTGAGAATTACGTCGGAAAAATTTGCCTTGATATGTCGGTC
CCTGGAGCAAGACCCCCAGGACGCCCAAGAAAGCGATGGCTGGACACCGTGAAGCAGGAT
ATGAGAGCCAATGGACTTACCACCGCGGATGCTAAAGACCGTGCAAAGTGGAGGAGTTTG
AGCAGGAAGGCAGACCCTGGCTAA
Protein sequence:
MYRDSVSMVRTAVGDTKPFPISVGVHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADD
IALIDESRLTLERRVNLWKGTLENGGLKLNVTKTEYMACGSPDSCTIHIGPEPAVKSEKF
RYLGSILHESGGIDHDVQARISAAWAKWREVTGVVCDRRIPTKLKGIIYKSIIRPVLLYG
SECWPTLSRHTQELHVTEMKMLRWMCGVTRADRIRNTFIRGSLGVRDVADKLQESRLRWY
GHVARRPENYVGKICLDMSVPGARPPGRPRKRWLDTVKQDMRANGLTTADAKDRAKWRSL
SRKADPG