| Genomic Position | scaffold1781:+ 452-4199 |
|---|---|
| See gene structure | |
| CDS Length | 1359 |
| Paired RNAseq reads | 203 |
| Single RNAseq reads | 2157 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005434 (2e-34) |
| Best Drosophila hit | replication protein A2 (2e-09) |
| Best Human hit | replication protein A 32 kDa subunit (4e-08) |
| Best NR hit (blastp) | replication protein A2 [Bombyx mori] (2e-58) |
| Best NR hit (blastx) | replication protein A2 [Bombyx mori] (3e-54) |
| GeneOntology terms | GO:0005634 nucleus GO:0006260 DNA replication GO:0005515 protein binding GO:0003677 DNA binding GO:0008150 biological_process GO:0003697 single-stranded DNA binding GO:0047485 protein N-terminus binding GO:0005662 DNA replication factor A complex |
| InterPro families | IPR014892 Replication protein A, C-terminal IPR004365 Nucleic acid binding, OB-fold, tRNA/helicase-type IPR016027 Nucleic acid-binding, OB-fold-like IPR012340 Nucleic acid-binding, OB-fold IPR011991 Winged helix-turn-helix transcription repressor DNA-binding |
| Orthology group | MCL13095 |
Nucleotide sequence:
ATGAATTCAAATTGTACATATTTAGAAAAGACAGTCAAAGATAATATGAATGTTATAAAA
GAATTAAATGAAAATATTCAATCATTGAAAAATGAAAAGAGTAATCTTGAGAGGAGACTA
AGCCTTAGTGAATCATTAGCAAATAAAAACACAGAAGCAGCTCAATCCACTACAGAACAA
TTGCTTAAAGCCAATCAAATTATCACCAAACAAAATAATGATCTTCTTGAAATTAAAGAT
AAGCTTCTATGCAGAACAGCAATAGCGTTGGAACAGGAAAAAGTTATAGAAGGAAACATT
AAAGAAATTGAGGAACTCAAAATAAAAATAAAATCCAGTTCAGAGGAAATTGAGAAGATC
AAAAGTGAACTTGACGCATTTAGAGAAATGTATAATAAAAATGAGGAAGCATTAAAAGAT
CGTGATGAGACTATAAAAAATAACAATATGGTGATCCAATGGCTACATAAGAAATTAGAA
GGCAATGGAATGGGAAGAAATGATCATCCTCATAAGAGCAGCTCAGATTTTCAATCTGCA
ACATCAACACCTTATTTTTTACAAAAAAATTTACAGAACTGTTCTCAAGAAACTGATGTA
TCAATTAATTTTTATGCTACATCTAAATTATCCAGTGTGGAAGATAGCCCTAAACCATCC
GCTCCAAATAAAAAAGGCTTGGATCCGAAGTATTTAAAACCAGCTACTGAAGGAAATAGA
GTACAAAAAAAGGATTGTTCCAGAGAAGCTGCTAATGTTCAGAATCAATCGAGAACTGAT
GGTGGATTCTTCAACAGTCAAAACGAATTTGGAAATGTAACTAACACTCCCAACCAAAGG
CAAAAGTCTGCGAGACGTGCTTCACGCACTGCCCCAATTGTTATTAAACAGGCTTTAAAT
TGTGGGGACGAAGGAATTAAAATATGGGGCACAGAAATACAAATTGTGTCAATTGTTGCT
CGTGTTCAAAATATTAGAGAACAAAGTACCAAAATCACATACACAATACAAGATATAACT
GGTAGGATGAAAGCTGTTCTCTGGTTAGAACAAGAATCAATGGATGAAAATGATGTGGAA
CCTATTGGTAATAATTCTTCGATGATGGGTGGATTGCCGGCCAACTCGATGGTAGGAATG
AATGATAACATGTCATTCAATGGATTGAATGTCCGTCAAGTGATGGTGTACAAACTGATA
TCATCGGCTGCATCAGACCAGGGTATAAGCAAGCAGGAATTGCTATCGAACTTGAGGGAT
CGTATGACTGAAGTTGAACTGGAGAATATTCTGGAATTCATGTGCAACGAAGGTCATACT
TATTCAACTATTGATGAAGAGCACTTCAGGGCTACTTAA
Protein sequence:
MNSNCTYLEKTVKDNMNVIKELNENIQSLKNEKSNLERRLSLSESLANKNTEAAQSTTEQ
LLKANQIITKQNNDLLEIKDKLLCRTAIALEQEKVIEGNIKEIEELKIKIKSSSEEIEKI
KSELDAFREMYNKNEEALKDRDETIKNNNMVIQWLHKKLEGNGMGRNDHPHKSSSDFQSA
TSTPYFLQKNLQNCSQETDVSINFYATSKLSSVEDSPKPSAPNKKGLDPKYLKPATEGNR
VQKKDCSREAANVQNQSRTDGGFFNSQNEFGNVTNTPNQRQKSARRASRTAPIVIKQALN
CGDEGIKIWGTEIQIVSIVARVQNIREQSTKITYTIQDITGRMKAVLWLEQESMDENDVE
PIGNNSSMMGGLPANSMVGMNDNMSFNGLNVRQVMVYKLISSAASDQGISKQELLSNLRD
RMTEVELENILEFMCNEGHTYSTIDEEHFRAT