| Genomic Position | scaffold4772:+ 888-5977 |
|---|---|
| See gene structure | |
| CDS Length | 1812 |
| Paired RNAseq reads | 491 |
| Single RNAseq reads | 1206 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001917 (7e-153) |
| Best Drosophila hit | another B-box affiliate, isoform C (9e-30) |
| Best Human hit | tripartite motif-containing protein 71 (5e-22) |
| Best NR hit (blastp) | PREDICTED: similar to CG15105 CG15105-PA [Tribolium castaneum] (2e-97) |
| Best NR hit (blastx) | PREDICTED: similar to CG15105 CG15105-PA [Tribolium castaneum] (7e-95) |
| GeneOntology terms | GO:0005515 protein binding GO:0008270 zinc ion binding |
| InterPro families | IPR001258 NHL repeat IPR018957 Zinc finger, C3HC4 RING-type IPR017907 Zinc finger, RING-type, conserved site IPR001841 Zinc finger, RING-type IPR013017 NHL repeat, subgroup IPR013083 Zinc finger, RING/FYVE/PHD-type IPR011042 Six-bladed beta-propeller, TolB-like |
| Orthology group | MCL18006 |
Nucleotide sequence:
ATGGCAGAAAAGGTTAAGAAGAAACCATCGTTTTTTAGTTTGAAACGTTTCAACAGTCAA
AAGAGTATAGATGAACCAGTAACACCAACTCAACCAAGTCCGCCAGCGTTAAAACCAGCG
CAGAGAAGAATGAGTAATACAGACACGAAACCGAGGAAAGAGTCTGCTGCTGGGATTAGA
GAACTAGTGCAATGTTCGTTGTGCTTGGAAATGTTGAGTAATCCCAAAATGTTGCCCTGT
CAACACACCTTCTGTTGTGCGTGTCTCAAAGTATATGTCGCAGATCAACCGGTGATAACT
TGTCCCATATGCTGCACGCGAATACAAGTACTTAGACAAAACTTCGTAGAGGAACTGCCG
TCTAATCTTTACATTGACACATTATTAACCATGTTTGGTGTCGAAAAGAAATCTGATACT
CATACTCCACCGGTGACTCCATATAATCTACAAAGTGTCGATCTGTTTGCTGCTGGAGTT
AGGTGCTCTCAATGTCGGACCATGTGTGATAATTCTGACGTTTCAGCTTGTCAACATTGT
AAATTGAACTTTTGCGGCGTTTGCTGGTCACAACACTTGAAAGACATGAGGTCACAGATT
AGTTCAATTTTGAAGGAATTAGACGCTGCCTCCAGTCGACTCGAACACAAAGTAGAACAT
TATAAGGATCGCTGTGAACGAATCGTTGAACAAATTAACATAGCCGCGGAGGAAAAAATT
AACACAATTTTGGAAAGCAAAGTAAATCTACTAGAAGAAGCCAACAGATTAACTAAATCC
GGAGATCTATCCGCATTAGCTCTAAAATCATCTCTTGAAGAGGCTAGAGATGCATCTATT
CAAACAATGACAAGCGAAGACGATAATGACGTCGAAATGATTAACAAATTTATAAACCTA
CATCAAAACACAATCCAATTGTTATCCGAAGTATCGAAATGGGATGCTGAAAAATTTGTA
TTTGACAAAGAAAACTTTAGCATAGAATCGGATTCGTCCGTGCCTTGTGATGCTGAATCA
GATGATCCTTTGCCCGAAACAGTTAAACAGAATAATCCTATGGAAAATGAGGCCAGCCTT
ATTTTGCACTATAGATTATCATGTGAAGGAATGCTGTGCCCGGTACACATCGCCTTCATG
AAACCTTTAGGAGAGATTTATGTTACAGATAAATGGAAACACTGCATCCACGTGTTCTCT
AAGGACGGTGATTACTTAAGGTCGTTGGGACAGAAAGGCAGTCGTGTGGGCATGTTGAGA
TCTCCTGAAGGCATTGCTACTGATAACATCAGTAATCAGATATATGTCGTGGATACTGGC
AATGATAGGGTCCAGGTATTAGATACGGAAGGTAAATTCATCGACCAATACGGTGTGGCC
ACGAGAGCGCAAACTAGTAACACGGCCAACGTTTGGACACAACAAGAAACTTTGTGTACG
GAATTCAACGCGCCTACAGCTGTAGCAGTGACCAAAGATCGAGTGATTGTATTGGACAGT
GGGAATCGAAGAGTGAAAATATATAACAAACAGGATAAGAATAAAATCACAGAGTTCGGG
TCTTTGGGACACAGGAAGGGACAATTCAGACAGCCAGAAGTATTGACGGTCGATCCCCTG
GGTTTTATACTAGTTGGTGATTCAGGCAACTGTCGAGTCCAAATCTTCAAACCGAACGGA
CAATTGGTCCGGGTTTTCGGAGGTCTAGGTGCTGATCCCGGCAAATTTGGATGGATATCA
GGAATATACGTCACCAAACAGCTAGACATTATAGTCAGCGATACCAAAAATCACAACGTC
AACTTCTTCTAA
Protein sequence:
MAEKVKKKPSFFSLKRFNSQKSIDEPVTPTQPSPPALKPAQRRMSNTDTKPRKESAAGIR
ELVQCSLCLEMLSNPKMLPCQHTFCCACLKVYVADQPVITCPICCTRIQVLRQNFVEELP
SNLYIDTLLTMFGVEKKSDTHTPPVTPYNLQSVDLFAAGVRCSQCRTMCDNSDVSACQHC
KLNFCGVCWSQHLKDMRSQISSILKELDAASSRLEHKVEHYKDRCERIVEQINIAAEEKI
NTILESKVNLLEEANRLTKSGDLSALALKSSLEEARDASIQTMTSEDDNDVEMINKFINL
HQNTIQLLSEVSKWDAEKFVFDKENFSIESDSSVPCDAESDDPLPETVKQNNPMENEASL
ILHYRLSCEGMLCPVHIAFMKPLGEIYVTDKWKHCIHVFSKDGDYLRSLGQKGSRVGMLR
SPEGIATDNISNQIYVVDTGNDRVQVLDTEGKFIDQYGVATRAQTSNTANVWTQQETLCT
EFNAPTAVAVTKDRVIVLDSGNRRVKIYNKQDKNKITEFGSLGHRKGQFRQPEVLTVDPL
GFILVGDSGNCRVQIFKPNGQLVRVFGGLGADPGKFGWISGIYVTKQLDIIVSDTKNHNV
NFF