| New model in OGS2.0 | DPOGS209833 |
|---|---|
| Genomic Position | scaffold996:+ 9473-17480 |
| See gene structure | |
| CDS Length | 1614 |
| Paired RNAseq reads | 248 |
| Single RNAseq reads | 698 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008056 (0.0) |
| Best Drosophila hit | katanin p60-like 1, isoform D (6e-108) |
| Best Human hit | katanin p60 ATPase-containing subunit A-like 1 (2e-94) |
| Best NR hit (blastp) | aaa atpase [Aedes aegypti] (1e-146) |
| Best NR hit (blastx) | aaa atpase [Aedes aegypti] (2e-140) |
| GeneOntology terms | GO:0005783 endoplasmic reticulum GO:0016887 ATPase activity GO:0051013 microtubule severing GO:0008352 katanin complex GO:0008017 microtubule binding GO:0005875 microtubule associated complex GO:0007017 microtubule-based process GO:0005524 ATP binding GO:0016322 neuron remodeling |
| InterPro families | IPR003959 ATPase, AAA-type, core IPR003960 ATPase, AAA-type, conserved site IPR003593 ATPase, AAA+ type, core |
| Orthology group | MCL19556 |
Nucleotide sequence:
ATGTCACAAGATATGAAGTCAGCTTCCATGGATCTTAATTCATCTCGTTCCTGGTGTCGG
AGGGAGAACGACGTTAAGATAGAGCTCGGCTTCAACGTGCCTCTGGGAGCGATGTCGGCA
CACCCTGTATTTCATTCCTCTTGGGACATCGGATGTCCTAGTTCTGGATTTCACCAAATG
GCCAGAATGATGGATCGTATGATGTCTGAAAGCCTTCAGCCGTTTGGATTTGCAAGATTC
ACAACGCACCGGAGTGGAGATGACAACGGAAATTCTATGCCCAGAGATGGATTACGGGCT
GAAAAAAGTGATAATCGCAGAGAACGGGCGAGAAACCCTCAAACTCACGCTGGTAATGGG
ACAAGACATCCACCGACTCAAGTAGTCAAACCTACTCCGATCAACTCGTTTCAAGATAAT
GCATCTGATCAGTCGAAACCAACAGACCCAACGACAGAGAAATGGGCTGGAACATTAAGA
AGACGCGACCCTGACATACAGCCAACTTTACCATCGATCATTCGTAAAGCGTCTTCGACA
CATTCGTCTATCAGTAGTGGAAGAAAAACCCGATCTGTAGATAGAGTACCAAGAACGAGG
CGGCAGTTAGTGCCGATTAAACCAACCATAAGACCGCGAGATGTGCCAGCAGAAGGAGAT
GTTACTATGCTAGAGAAAGATGAAAAACTTTTTAACGCGACTGGTTATGAAGTGCATCTC
GTTGAAACGTTAGAAAGGGATATTTTACAAAGGAATCCAGATGTTCGCTGGAAGGACGTG
ATTGGTTTAGACGATGCAAAATCTGTGCTACAAGAAGCAATGGTACTGCCGCTAGTGATG
CCTGACTATTTTAAAGGTATTCGACGTCCATGGAAAGGAGTTCTCTTAACTGGACCGCCG
GGAACTGGTAAGACACTCCTAGCGAGGGCAGTGGCGACCGAGTGCAGGACCACATTCTTT
AATGTATCTTCCGCAACCCTTACATCCAAATATCGCGGTGATTCAGAAAAACTTGTCAGG
CTTCTTTTTGATATGGCTGCTTTCTACGCTCCTAGTACAATATTTTTAGATGAAGTTGAT
TCTCTTTGCGCCGTTCGTGGAGCCGATTCAGAACATGAGGCGTCCCGACGTTTTAAAGCT
GAACTACTTATACAAATGGATGGATTAGCTGCTGCTTTCAATCAAGATAAAGTTATAATG
GTGTTGGCTGCAACTAATCATCCATGGGACATCGATGAGGCGTTCCGAAGAAGATTTGAG
AAGAGAATATATGTTGGTCTGCCTGATGAGCCAACGAGAGTCAAATTACTAAATCTCTGT
CTCCGTGAAGTCATTTTAGGAGATGATGTTGACTTGAAAGATCTGTCGACGAAGCTGGAA
GGATATAGCGGATCTGATATAAATAATCTATGCAGAGATGCAGCAATGATGACAATGCGC
CATAAAGTAGCAGGAAAAAGTCCGGAACAAATTCGTCGTTTGAAACGTTCTGAGTTGGAA
GCACCAGTCACCAAAGCTGACCTCATAGCTGCCATGGACAAAACGCGACGCACAGTCACT
CAAGCTGATGTAGCGCGTTACAGCAACTGGATACAAAAACATGGCTGTTCCTAG
Protein sequence:
MSQDMKSASMDLNSSRSWCRRENDVKIELGFNVPLGAMSAHPVFHSSWDIGCPSSGFHQM
ARMMDRMMSESLQPFGFARFTTHRSGDDNGNSMPRDGLRAEKSDNRRERARNPQTHAGNG
TRHPPTQVVKPTPINSFQDNASDQSKPTDPTTEKWAGTLRRRDPDIQPTLPSIIRKASST
HSSISSGRKTRSVDRVPRTRRQLVPIKPTIRPRDVPAEGDVTMLEKDEKLFNATGYEVHL
VETLERDILQRNPDVRWKDVIGLDDAKSVLQEAMVLPLVMPDYFKGIRRPWKGVLLTGPP
GTGKTLLARAVATECRTTFFNVSSATLTSKYRGDSEKLVRLLFDMAAFYAPSTIFLDEVD
SLCAVRGADSEHEASRRFKAELLIQMDGLAAAFNQDKVIMVLAATNHPWDIDEAFRRRFE
KRIYVGLPDEPTRVKLLNLCLREVILGDDVDLKDLSTKLEGYSGSDINNLCRDAAMMTMR
HKVAGKSPEQIRRLKRSELEAPVTKADLIAAMDKTRRTVTQADVARYSNWIQKHGCS