| New model in OGS2.0 | DPOGS215679 |
|---|---|
| Genomic Position | scaffold1403:- 83376-89920 |
| See gene structure | |
| CDS Length | 2826 |
| Paired RNAseq reads | 781 |
| Single RNAseq reads | 1851 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003578 (0.0) |
| Best Drosophila hit | CG14786 (7e-91) |
| Best Human hit | leucine-rich PPR motif-containing protein, mitochondrial precursor (3e-51) |
| Best NR hit (blastp) | leucine rich protein, putative [Aedes aegypti] (4e-108) |
| Best NR hit (blastx) | leucine rich protein, putative [Aedes aegypti] (7e-106) |
| GeneOntology terms | GO:0016491 oxidoreductase activity GO:0055114 oxidation reduction GO:0046914 transition metal ion binding |
| InterPro families | IPR002885 Pentatricopeptide repeat IPR011990 Tetratricopeptide-like helical |
| Orthology group | MCL18829 |
Nucleotide sequence:
ATGTCATCAAGAAAGCAAGGGTTGCTACTTATAAAATGTTGCACAGAACTAATGCCTGAT
GAAATGCCATCGACCAGAATGGCTTTAGTCCAAGAGTTATGGAATGCTATTAAACCTCAT
ACCACTTTTGATGTTGAGCATTACAATGAATTGCTGAGGGTATACATTGCAAACAATAAA
AAACTTGTAGTCAGTAAGTTTATTGGCGAAATGGGTGCTGTGAAACCTAATTTGACTACA
TTCGAACTGATCCTAAGGACTCTTGGAGAGGCCGGAGACATCAATCAGTGTACTGAGGTT
ATTTCTAATATGAAAGCCCAAGGACTGCCAGCGACTGAAAATGTATTTAACTCATTAATA
ATTTGTCATGGAAAATCTGGGAATTTAGATAATATCCCTGAAATTTTAACAATGATGAAA
TCTCTGCAACTGGACTACTCTGTCAATACATATACAGCAATCGCTAGAGCATATGGATGG
AATAAAAAGAACCAACAACTTATAAAGGAAATGAATACAGCCGTAAAAAACGGAATTACT
TTTGGGGAGGTCCATATTATGGATATAGTAAAAACCTTGGCATTTGTTGGAAATCATACT
TCTATACCGGAGGTACTTAAGTATCTGCCTAGACAGATTTTAGAATCTCCATCTATTACT
CCTACAATGCAGAGTGTGGCAACCCTACTGGTATTTCAAAGTCACCCGATGGCAGCCCTG
GAAATATACAAAATTTTACCATTACCTTCTTTCGGACCAAAGGATGATATGGGACTACAT
GGAAGGAGTTTAGTTCGAGATTGTGTAAAGGCCTCAACACCATCCAGCGTAATAGCATTA
ATATCGCAAGAGCTTATGTCGTCCGGTCGTAACGCTATAGCTCTGCAGAACGCAGCCGAA
GCGGCTTTGCAGTTAGGAAAAGTTCCCTTAGCTTTGGACTTGTTTACACGAATGAAGCAG
TTCGGGATGCCTGTTAGACCACACTACTTCTGGCCGATATTGCTGCAAACATCTAAAACT
TATGGAGAGAAAGGCGTAATGAACACTTTATCGACAATGTCAGAAATGGAAGTCAAACCG
GACTATGAGACTATCATGGACTATACACTGCCTTATGTCAGTTTCACCTCACCACAGAAC
TTAATGAAGAAGTTTCAAGAGGCAGGTCTAACAGTGACCAGTGTATTGACCCCTATGATG
GTTACCTTACTAAATACAGGACAAGTCAGAGCTGCCAGTGAGATATGTGAACTGTTTGAT
GGGAAGGTAGATGCAGAGTTAGTCATTAAACCTTTATTAAAAGGTTTCTTAATAAGCTCC
GATATAAAGTCTGTTATACATATATTAGAAGATATAACAGCTAAGGCTCTGGACAAGAAA
AAAGATTGGGTCGGACGGTTTTTGTGTGCCCTCATAAAAAATAAGAGAGTCAAAGAGGAT
TTTCCCGACATTCTGAGTATTGTTAAGGCGCTGCAAGGGAAAGGAATTAAAATATCAACA
TCAGCAGCCGACTATTGCTTGTCCCGTGTACCGGAACATCCCAAGAAGGAACTCATTGAC
AGTTTTAAAGAGGCTCTGGTGAATATAACAGACGAGAGATTAGTCGATGAAGGAGAGATG
TTTGTGCAACAGATTCAGCACCCGAAGCAAATGAACGAAGAGGCCTTGTCTGCTCACCTG
GTGGAGCTTGAATCTAAGGGGATGAACACACGGGGCGTCCTGCGGAAACTGTTGCAGCAG
TACTGCAGGTCTGGAAATCTGGCTGCCGCGAGGGAGATTCTGGAAAAGTGCGAGAGGGAG
GGGGTGTTCCTATCAGCTGGAATGAAAGCATCAATATTCGATCTTCACGTGAAACAGGGG
GAGTTGGATATGGCTGAATTGGTGTTAGCGGATTTGAACAAATCATCACCAAATTTTACT
TTGGATGAATACAAAGTCATAGACTTCGCGACCCTCATGGTATATAGAAAGAAAATCGAC
AAGGCTTTCGAGTTAATCAACGAGCAGTCGAGAAAGCGGCATATAACTGGTGGACGTAAT
CTCTCAATGAACTGTTGGCGGCTGATGGACGCGGTAGCGGCTCAAGGCTCAGTGACTGAG
GCCAGGCGGATGTTCACTCTGCTTACTTCCTTACGTTACTGCAAACCCTCGAACACACTT
CTGGGACCAGTAGTACGAGCTCATCTAAAGAACGGTGACTTGGAACAGGCGGTACAGGAG
TTCGTAAGTCTGGCGGAAAAATACAAAAAGACACCCTTGAAACACGAGTTGCTCTGTAAA
GTTTTGCTGGCTATGAACGAGGGAAAATCTGAAGAAAGGTTCATAAGTAACGAGCAATCA
AACGGGAAACTAAACAAATTAGCTCAAACTATACTCAATGTGGACAGACAAGTCCACGGG
GCGAGTGATGTTCAGGTAACCCTAATAGCGGCGCTGGCGGATGTGGGTTACAAGATGACA
CTCCGAAAAATTTTCCTAGACCCTACTACGAAGTTCCATCCGGATGCTTTGCTAAGACAT
TGCGAGAGATTCGCGGATGAGAAGAAAATTCACGCGTTGGAAGCCATCGCTGATACCTCC
AAAGACCTGAGACATGTCCATATTGAAGAGATTTATAACCTGATCCTGGATATATATCAA
CGAGAAGACAATTGCAAGGACGCGTTAACATTATTCTACAAAATGCAAGAAAACGACATA
GAACCCTCCAAGAAGTTCATAGAGAATATTTGTTCGCTATTCAAGTCCAATAATAAACTC
GTACCGCCGGATGTAGCGCTGATTAGAGACAAACTAACAAAAGGCGCCTCTAAGAAAGCT
GTCTAG
Protein sequence:
MSSRKQGLLLIKCCTELMPDEMPSTRMALVQELWNAIKPHTTFDVEHYNELLRVYIANNK
KLVVSKFIGEMGAVKPNLTTFELILRTLGEAGDINQCTEVISNMKAQGLPATENVFNSLI
ICHGKSGNLDNIPEILTMMKSLQLDYSVNTYTAIARAYGWNKKNQQLIKEMNTAVKNGIT
FGEVHIMDIVKTLAFVGNHTSIPEVLKYLPRQILESPSITPTMQSVATLLVFQSHPMAAL
EIYKILPLPSFGPKDDMGLHGRSLVRDCVKASTPSSVIALISQELMSSGRNAIALQNAAE
AALQLGKVPLALDLFTRMKQFGMPVRPHYFWPILLQTSKTYGEKGVMNTLSTMSEMEVKP
DYETIMDYTLPYVSFTSPQNLMKKFQEAGLTVTSVLTPMMVTLLNTGQVRAASEICELFD
GKVDAELVIKPLLKGFLISSDIKSVIHILEDITAKALDKKKDWVGRFLCALIKNKRVKED
FPDILSIVKALQGKGIKISTSAADYCLSRVPEHPKKELIDSFKEALVNITDERLVDEGEM
FVQQIQHPKQMNEEALSAHLVELESKGMNTRGVLRKLLQQYCRSGNLAAAREILEKCERE
GVFLSAGMKASIFDLHVKQGELDMAELVLADLNKSSPNFTLDEYKVIDFATLMVYRKKID
KAFELINEQSRKRHITGGRNLSMNCWRLMDAVAAQGSVTEARRMFTLLTSLRYCKPSNTL
LGPVVRAHLKNGDLEQAVQEFVSLAEKYKKTPLKHELLCKVLLAMNEGKSEERFISNEQS
NGKLNKLAQTILNVDRQVHGASDVQVTLIAALADVGYKMTLRKIFLDPTTKFHPDALLRH
CERFADEKKIHALEAIADTSKDLRHVHIEEIYNLILDIYQREDNCKDALTLFYKMQENDI
EPSKKFIENICSLFKSNNKLVPPDVALIRDKLTKGASKKAV