| New model in OGS2.0 | DPOGS201419 |
|---|---|
| Genomic Position | scaffold3804:- 12014-16190 |
| See gene structure | |
| CDS Length | 1650 |
| Paired RNAseq reads | 208 |
| Single RNAseq reads | 1276 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002716 (0.0) |
| Best Drosophila hit | CG5009 (3e-158) |
| Best Human hit | peroxisomal acyl-coenzyme A oxidase 1 isoform c (1e-136) |
| Best NR hit (blastp) | PREDICTED: similar to acyl-CoA oxidase [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to acyl-CoA oxidase [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0016401 palmitoyl-CoA oxidase activity GO:0055114 oxidation reduction GO:0003995 acyl-CoA dehydrogenase activity GO:0006635 fatty acid beta-oxidation GO:0050660 FAD binding GO:0005777 peroxisome |
| InterPro families | IPR002655 Acyl-CoA oxidase, C-terminal IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR012258 Acyl-CoA oxidase IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPR009100 Acyl-CoA dehydrogenase/oxidase IPR023570 Acyl-CoA oxidase, peroxisomal IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal |
| Orthology group | MCL10186 |
Nucleotide sequence:
ATGTTTATGCCAACCATCATAACTCAGGCTAATGATGAGCAACAGGCTAAATGGCTCCCG
AGATCCTGGAACTGCAACATCATTGGTAGTTACGCTCAAACTGAACTGGGTCATGGTACA
TTTGTTCGCGGTCTGGAAACAACAGCAACTTACGATCCTTCCACTAAGGAGTTTGATCTA
CACAGCCCTTCACTCACCTCCTATAAGTGGTGGCCAGGGGGATTGGGTCATACGGCAAAC
TATTGTATACTGATAGCTCAACTTTACACGAAGGGAAAATGCCATGGAATACATCCGTTT
ATTGTCCAATTAAGAGACGAAGAAACACATGTTCCTTTACCCGGAATTAAAATTGGTGAT
ATCGGAGCGAAATTAGGACTCAATGAAGTTAACAATGGGTTTTTAGGATTTGATCATGTC
AGAATACCTAGAGACCAAATGTTAATGAAACACGCACAGGTTTTAGAGGATGGCACTTAC
ATTAAATCACTTAATAGTAAATTAAATTATGGGCCGATGGTTTTTACAAGGGTAGTGATT
GTTTTTGACGTTGCCAATTATTTATGTAAAGCGGCAACAATTGCTACAAGATATTCAGCT
GTACGCAGACAGTCACAGAAAAAACCTGGTGAACCGGAACCCCAGATCTTGGATTACGTG
ACGCAGCAGCACAAGTTGATGATAGGTCTAGCGTCGGTCCACGCCTTCAGGACATGCGCT
GATTGGCTCTGGCAGATGTACAACAACGTCACCGCTGAACTCGAAGCGGGGGATATGGAG
AGACTTCCAGAGCTTCACGCGTTATCGTGCTGTTTGAAAGCGGTGAGTACATCAGATGCC
GCTCAGTGCGTGGAGCGCTGCAGACTGGCGTGCGGCGGACACGGGTACATGCTGTCCTCC
AACTTGCCGCTCACATACGGTCTGGTCACGGCCGCCTGCACTTACGAAGGAGAGAATACC
GTCATGTTGCTGCAGACTGCCAGATTTCTGGCAAAAACATGGCAACAAGTTGGCAGTATA
AAATTAACACCCACTGTGGAATATTTAAAATACTCCGCAAATGAAGGTTGCAGGAAGTGG
GAAAATTCTGTTGAACAAATCATAGAAGCATTTAAAATAATTTCAATGAAAAAAATTCAA
TCTTGCGTAAAGGATATGGAAAATCGGGTTTCATCTGGAACATCATTTGAGGATGCTTGG
AATATGAGTTCAGTACAATTGGTTTCAGCAGCAGAGGCGCATTGTAGAGTTATAATTCTG
TCAACATTCAACGAGGAAATAAAAGAGAAAAGTAAAAGTGCGTCACCAGAATTAGCCGTC
GTACTTAACCAGCTATTAGAATTATACACAGTCTATTGGGCACTTGAGAAATCTGGTGAT
TTATTGCAGTATACATGTATAAGTAAGGAGGACTTGGAGGGATTGCGTTGGTGGTACGAA
GATATTCTTATACAGCTTCGACCCAACGCCGTTGGTGTAGTTGACGCTTTTGATATTAGA
GACGATTTTCTGCATTCAACACTGGGAGCTTATGATGGTCGTGTCTACGAAAGGTTGATG
GAAGAAGCACTCAAATGTCCTCTAAATGCTGATGTCGTAAATGTCTCTTTTCACAAATAT
CTGAAACCATTCTTGCGAGGGAAACTGTGA
Protein sequence:
MFMPTIITQANDEQQAKWLPRSWNCNIIGSYAQTELGHGTFVRGLETTATYDPSTKEFDL
HSPSLTSYKWWPGGLGHTANYCILIAQLYTKGKCHGIHPFIVQLRDEETHVPLPGIKIGD
IGAKLGLNEVNNGFLGFDHVRIPRDQMLMKHAQVLEDGTYIKSLNSKLNYGPMVFTRVVI
VFDVANYLCKAATIATRYSAVRRQSQKKPGEPEPQILDYVTQQHKLMIGLASVHAFRTCA
DWLWQMYNNVTAELEAGDMERLPELHALSCCLKAVSTSDAAQCVERCRLACGGHGYMLSS
NLPLTYGLVTAACTYEGENTVMLLQTARFLAKTWQQVGSIKLTPTVEYLKYSANEGCRKW
ENSVEQIIEAFKIISMKKIQSCVKDMENRVSSGTSFEDAWNMSSVQLVSAAEAHCRVIIL
STFNEEIKEKSKSASPELAVVLNQLLELYTVYWALEKSGDLLQYTCISKEDLEGLRWWYE
DILIQLRPNAVGVVDAFDIRDDFLHSTLGAYDGRVYERLMEEALKCPLNADVVNVSFHKY
LKPFLRGKL