| New model in OGS2.0 | DPOGS207584 |
|---|---|
| Genomic Position | scaffold325:- 152487-158789 |
| See gene structure | |
| CDS Length | 1557 |
| Paired RNAseq reads | 411 |
| Single RNAseq reads | 1496 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004692 (0.0) |
| Best Drosophila hit | SMSr, isoform A (2e-112) |
| Best Human hit | sphingomyelin synthase-related protein 1 isoform 1 (1e-96) |
| Best NR hit (blastp) | PREDICTED: similar to SMSr CG32380-PA, isoform A [Apis mellifera] (3e-139) |
| Best NR hit (blastx) | PREDICTED: similar to SMSr CG32380-PA, isoform A [Apis mellifera] (8e-129) |
| GeneOntology terms | GO:0003674 molecular_function GO:0016021 integral to membrane GO:0006686 sphingomyelin biosynthetic process |
| InterPro families | IPR010993 Sterile alpha motif homology IPR013761 Sterile alpha motif-type |
| Orthology group | MCL12356 |
Nucleotide sequence:
ATGGAAATGTGTATTGTTAAGTGGAACAACAAAGAAGTTTTAGAATTATTACATAAAGAG
AAAATATCAAGCTTCATAATTGAAATTTGCAAGACTCAAGATATTGATGGACAGTGTTTA
CTTTCTTTTGTCGACCGCGATTTCTATGACTATCCATTTGATCAGTTAAAACTGGGTGAA
AGAAAAAGGTTTATACTGTTAGTGAAAAAATTACAAAGAAATAATAGAAGTGCAATGTAT
GAACTTGGATTATACGATGATCATACATCAAACAATCCTGCTACAAATATTAATTTCGTT
GGAACAAATTTATCACATTTAAGCTACAATCTCCATAATCAATTACAAAATGAACTGTAT
GCAAGAAATACAGAATGCATCTCAAATTTTACACCAGATGTGAAAGCTTCCAAATTAAAG
CCAGAAGTGTGGAAAACTGCAATTGCCTTAGGGTATGTGTTTCTTGTGACATGGGTGACG
GCAGTAGTAATGGTGATTGTCCACGACAAAGTTCCGGACATGAAAAAATATCCACCTCTG
CCTGATCTCTTCCTAGATAATGTACCACATATACCCTGGGCTTTTGATATGTGTGAAATA
ACTGGCTCATTCCTAATGGCTATCTGGCTAGTTGTTCTGTTCTTCCATAAACATAGGTTT
ATAATCCTGAGAAGATTTTTCGCACTGGCTGGTACGGTGTTCCTGTTGCGTTGTTTTACT
ATGTTGATAACGTCGCTCTCTGTGCCGGGATCACATCTCAAATGTGAGCCTCGGTTCTAT
CCGCCTGCTGACGATCTCACGGTTTGGGGGCGCCGCCTCCGACAGGCCTACGACATCTGG
AGCGGTGCTGGCATGTCAGTACGCGGAGTCCGTACTTGCGGAGACTATATGTTCTCAGGG
CACACCGTGGCCTTAACGCTCCTAAACTTTTTTATCACCGAATACACATCCCGTAGTCTA
TACCTCCTTCATATACTGACATGGGTAATGAATATGTTCGGTATCTTTTTCATTCTGGCG
GCTCATGAACACTACTCCATAGACGTGTTCATAGCCTTCTATATTACATCGAGACTCTTC
CTTTACTACCACACGCTCTCAAACAACCAAGCTTTGATGCAATCTGATTCTTCCAGAACT
AGAATATGGTTCCCGCTGCTGTCGTTCTTCGAGTCCGAAGTGGACGGCATCGTTCCTAAC
GAGTACGAAGGGCCGATGGAGATCGTGATCAACCTGAAGCAATGGCTGGTGCAGCTAGTG
TTGGATGTGAAGGCGTCGTCTGTGGCCAGGGTCGCGGGCAGCAAGCTACAGGAGGGCGCC
GCTATGGGAGAGTACTCGATGGTGAGGCTCGTGGACGGCATCAAACGGAACATCAGCATT
ATGGAGGAGTATAAAAACTCGCGCCAGAGGCTCGCCACACTAGACAAGAACGTGCAAGCC
GGCCACGACCTGCCCGAGGCCGATTTACGACATGGGAAAATAGCTGAGCTTACCAACGAC
GCCCTCTTCAGAGATTTCAGCAAACCACCCTCACCGGCCATCAAGAAGAATATCTGA
Protein sequence:
MEMCIVKWNNKEVLELLHKEKISSFIIEICKTQDIDGQCLLSFVDRDFYDYPFDQLKLGE
RKRFILLVKKLQRNNRSAMYELGLYDDHTSNNPATNINFVGTNLSHLSYNLHNQLQNELY
ARNTECISNFTPDVKASKLKPEVWKTAIALGYVFLVTWVTAVVMVIVHDKVPDMKKYPPL
PDLFLDNVPHIPWAFDMCEITGSFLMAIWLVVLFFHKHRFIILRRFFALAGTVFLLRCFT
MLITSLSVPGSHLKCEPRFYPPADDLTVWGRRLRQAYDIWSGAGMSVRGVRTCGDYMFSG
HTVALTLLNFFITEYTSRSLYLLHILTWVMNMFGIFFILAAHEHYSIDVFIAFYITSRLF
LYYHTLSNNQALMQSDSSRTRIWFPLLSFFESEVDGIVPNEYEGPMEIVINLKQWLVQLV
LDVKASSVARVAGSKLQEGAAMGEYSMVRLVDGIKRNISIMEEYKNSRQRLATLDKNVQA
GHDLPEADLRHGKIAELTNDALFRDFSKPPSPAIKKNI