| New model in OGS2.0 | DPOGS207586 |
|---|---|
| Genomic Position | scaffold325:- 105385-107436 |
| See gene structure | |
| CDS Length | 804 |
| Paired RNAseq reads | 689 |
| Single RNAseq reads | 2304 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004694 (1e-94) |
| Best Drosophila hit | CG7967 (9e-67) |
| Best Human hit | vacuolar protein sorting-associated protein VTA1 homolog (2e-48) |
| Best NR hit (blastp) | vacuolar protein sorting-associated protein VTA1 homolog [Bombyx mori] (5e-104) |
| Best NR hit (blastx) | vacuolar protein sorting-associated protein VTA1 homolog [Bombyx mori] (8e-103) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR006745 Protein of unknown function DUF605 IPR023175 Vacuolar protein sorting-associate Vta1, N-terminal |
| Orthology group | MCL13720 |
Nucleotide sequence:
ATGACAACCAAGAAAACTCCTGAAGAAACTCAACTTCTTATGGCCGTCATGGATTGGCTT
GAACAAGCTAAGACTACGTTTAAAGACAATGAGGCAATTTCAAACGAAGTGGTGGCTCAA
GCACACTTAGAAAACTATGCTTTAAAACTATTTTTGTTTGCTGATAAACAGGATCGAGAA
CAAAATTATGGAAAAAATGTTGTTAAAGCATTTTATACAGCCGGAGTTATATATGACGTA
TTAACAACATTTGGTGACCTCACCGATGAAGCCGTACAAAACCGCAAATATGCTCGTTGG
AAGGCTGCATACATTCATAACTGCTTGAAAACAGGAGAGACCCCAGTACCAGGTCCAATG
CAATCTGATAATGAAAACCAAGATAATGAAACTGAGTCGACAGACCCTGGCCAGCCAGCT
CCCTCAAATACTGACAACTTTGGCTTTTCAACAAATTCACCAGCAATGCCTCCTATGCCA
CCCAGCGTACCAACTAGTTTCAACAATAGCCTTCCAGATCCCAATTTGGCTCTGAAAGCA
GCTTCACAGTTACCGCCTGTGCCATACACACCTGATCCTAACCCTGGCGGGTTTGTACCA
TATGATCCCTCTCAACAACCGCAAACAGCTCTACTTTTTGGTGACAATTCAAGTGTGGCT
CAACTCAGCCCAGATCAAATAGCCAAAGCTCAGAAGTATTGCAAGTGGGCCAGTAGTGCT
CTAAACTACGATGACGTCAAGACAGCCATTAGTAATTTGAGGAATGCCTTGGAACTGCTT
CAAACTGGACGGGACCCTGCCTAA
Protein sequence:
MTTKKTPEETQLLMAVMDWLEQAKTTFKDNEAISNEVVAQAHLENYALKLFLFADKQDRE
QNYGKNVVKAFYTAGVIYDVLTTFGDLTDEAVQNRKYARWKAAYIHNCLKTGETPVPGPM
QSDNENQDNETESTDPGQPAPSNTDNFGFSTNSPAMPPMPPSVPTSFNNSLPDPNLALKA
ASQLPPVPYTPDPNPGGFVPYDPSQQPQTALLFGDNSSVAQLSPDQIAKAQKYCKWASSA
LNYDDVKTAISNLRNALELLQTGRDPA