| New model in OGS2.0 | DPOGS207588 |
|---|---|
| Genomic Position | scaffold325:- 77992-81826 |
| See gene structure | |
| CDS Length | 1128 |
| Paired RNAseq reads | 327 |
| Single RNAseq reads | 1059 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004696 (7e-105) |
| Best Drosophila hit | canoe, isoform C (3e-86) |
| Best Human hit | afadin (6e-64) |
| Best NR hit (blastp) | PREDICTED: similar to canoe CG2534-PA [Tribolium castaneum] (6e-114) |
| Best NR hit (blastx) | PREDICTED: similar to canoe CG2534-PA [Tribolium castaneum] (3e-92) |
| GeneOntology terms | GO:0003779 actin binding GO:0007391 dorsal closure GO:0005912 adherens junction GO:0007254 JNK cascade GO:0007219 Notch signaling pathway GO:0007265 Ras protein signal transduction GO:0005915 zonula adherens GO:0007394 dorsal closure, elongation of leading edge cells GO:0046328 regulation of JNK cascade GO:0007163 establishment or maintenance of cell polarity GO:0016318 ommatidial rotation GO:0005938 cell cortex GO:0048749 compound eye development GO:0005926 connecting hemi-adherens junction GO:0048730 epidermis morphogenesis GO:0048598 embryonic morphogenesis |
| InterPro families | IPR000159 Ras-association |
| Orthology group | MCL21927 |
Nucleotide sequence:
ATGTTGGATCGCGAGGCGCTCCGCAACATGATCCAGCAATGGAACGCCAACCGACTCGAC
CTGTTTGAACTCAGCGAACCGAATGAGAACTTGGAGTTCCACGGCGTGATGCGTTTCTAT
TTCCAAGATTCGGGTCAGAAGATAGCGACGAAGTGCATCAGGGTCGCCTCCGACGCTACA
GTTAGTGATGTTATAGAGACCCTGATAGAGAAGTTCCGTCCGGACATGCGCATGTTGTCC
CTCGGCTCTTACTCGCTGTGGGAGACTCACGGGCCCGAGGACGAACGGCGCCTGGAGCCC
CACGAGAAGCCGCTCCTGGTCCAACTCAACTGGCACGCTGACGACAGGGAGGGACGCTTC
TTGCTCAAGTGTCTCACCAATAGTGATCTTCCTCTATCATCAGTCAACGAGAAGAGCGAT
CAGAACTTCAAACGGAAATTGTCGAAGCGAGAGAAAAAAGAATTGAAGAAAAAAGAAAAG
CTATCAAGACTTAAGTCGGACACCAATGATGAAAATAGACCTGTGGCTGAGAAATTATAC
ACAGAGCTTCCTGAGACGTCGTTCACCCGCAGCATCAGTAACCCTGAAGCCGTCATGAGA
CGTCGAAGACAACAGAAACTAGAGAGGAAGCTGCAGCAGTTCCGCTCCAAAGACGGTGGA
CCTGACACTGGTGGCACTTTGAAGATCTACGGGTCGTCCCTGTGTCCGGACGTTCCATAC
AAGACGTTATTGTTATCTGTGGGCGACACGGCGGCCGGAGTCGTCCGTGAGATGCTCGAC
AAATACGGTTTGTCGCGACACGACCCGCAACAATTCTGCATCGTCCAGGTACATCACTAC
ACCCCCAGCGCACCTGCCGTCCTCATGACCTTCGGCCCCAACTCCCTGAAATGGGGCACG
AAGGTCCACCCTCCGTCAAGGGTGAGCCCCAGGTATTTCATGGTCGGGCTCACCCTGACC
CTCCCTCCTCCTATGAGGAGGGTGGCACCCGGCGGGGGTCCTTTCCGCCCAGTCCCGCGG
AAGAGGAGGGCTTCGGTTTTGTTGATTCTGACCCGAAGCCCCAACCTCTCTATGCGGCTG
ATCACGAGGTCAGTTCCGACCTCGGCCAGCCGCGCCGCCTCCTTGTAG
Protein sequence:
MLDREALRNMIQQWNANRLDLFELSEPNENLEFHGVMRFYFQDSGQKIATKCIRVASDAT
VSDVIETLIEKFRPDMRMLSLGSYSLWETHGPEDERRLEPHEKPLLVQLNWHADDREGRF
LLKCLTNSDLPLSSVNEKSDQNFKRKLSKREKKELKKKEKLSRLKSDTNDENRPVAEKLY
TELPETSFTRSISNPEAVMRRRRQQKLERKLQQFRSKDGGPDTGGTLKIYGSSLCPDVPY
KTLLLSVGDTAAGVVREMLDKYGLSRHDPQQFCIVQVHHYTPSAPAVLMTFGPNSLKWGT
KVHPPSRVSPRYFMVGLTLTLPPPMRRVAPGGGPFRPVPRKRRASVLLILTRSPNLSMRL
ITRSVPTSASRAASL