| New model in OGS2.0 | DPOGS207560 |
|---|---|
| Genomic Position | scaffold325:+ 171176-176761 |
| See gene structure | |
| CDS Length | 1707 |
| Paired RNAseq reads | 625 |
| Single RNAseq reads | 2255 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004710 (8e-100) |
| Best Drosophila hit | seven in absentia, isoform B (1e-18) |
| Best Human hit | E3 ubiquitin-protein ligase SIAH1 isoform a (1e-19) |
| Best NR hit (blastp) | E3 ubiquitin-protein ligase SIAH1B [Lepeophtheirus salmonis] (1e-22) |
| Best NR hit (blastx) | PREDICTED: similar to MGC97801 protein [Strongylocentrotus purpuratus] (9e-23) |
| GeneOntology terms | GO:0004842 ubiquitin-protein ligase activity GO:0030163 protein catabolic process GO:0046872 metal ion binding GO:0008022 protein C-terminus binding GO:0030877 beta-catenin destruction complex GO:0007275 multicellular organismal development GO:0008270 zinc ion binding GO:0006511 ubiquitin-dependent protein catabolic process GO:0005634 nucleus |
| InterPro families | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR001841 Zinc finger, RING-type IPR018121 Seven-in-absentia protein, TRAF-like domain IPR004162 Seven-in-absentia protein, sina |
| Orthology group | MCL39884 |
Nucleotide sequence:
ATGAGTAACAGAAAAGAAAACATTAAAAAATCACTAGGACTTACTGAATATCCCTGGAGT
TCTGATGATGAAGAGACTCTACCTCCTTGTCAGATTGCAACAATTAGACCACCTGAAATT
GTTGAGCCTAGAAGTACAACAACACTTGGGACCAGTGGGGCTGGTGTAATCCCTTCTTTT
ATCCCTGTAAGAAGAAACCAGGCAAGGTTGGAGCGGGAAGTCTTTTGGTCTTTGCTAAAC
AATCGTAGGACTATGATACCAACAGAATCCTCAAGACCCAGCACAAGCAGCACAAGTACT
TGTGAGAATCCACGACCGACTGAGTCCATTGACCTCAATAGTCCAGTTTCCAACTTGCAA
CGAATCTTTGCCATCAAAAGACTAACGCGTACTCTTAATCCAAATCGTTGCCCTAGAGGC
AACTACCTGAACGCATCCACGATATCTCCTTTTTCACCAGGTGTATTGTCTCCGAGGGTG
ACAGGTCGCTTGAGAAGGAGGATCCGACCGCCCTCAGACAGGACCAGTGTACCAGCCGTT
ATGGATGAAGAAAATCCTCCAATACAGGACGAGGGAGACGAGTCACCTGAGATTCCTTTG
ATGCAAACCATTCAAGATAACAATGACAATTCGGGTGAACAAGAAAATAGTCCTTCGAAC
ACAACAGCTGTTGGTATTCCTGAGGTCGAGGAGATAGTGGATATAGACGCGGAGGCAGAA
GCTAACTCGCAGGAGGGAACTGGCGATGACAACCAAGAACAGGCCAGTGATGACGAAGAA
CAAAATGATGCGATAGTAATATATATTTTTTATATGTTATTTAGTGTAGAGACCAAGTAT
ACTTCGTATGACGAAATAGAGCCGACTACTGTCAAGGAATTTAACCAGAACCTCCTCCGC
CTGCTGGAGTGTCCAGTGTGCCTGGAGTGGATGGAGCCGCCCATGTGTCAGTGCCGGCGC
GGGCACCTGGTGTGCGGGCGGTGCCGGGCGCGTCTCGCCGCCTGCCCCGTCTGCAGGACC
ACCTTCTCATCAGTCCGCAACCGGGCCATGGAAGCTGTGACGGAACTGCTCCGCTACCCG
TGTCGCTACGGCTGCGGTCGTGAGACTCGCCTCCGTCGCCGCGGGGTGCACGAGGCGAGC
TGTGCCGCGCGCCGCTACCGCTGCCCCGCGCCGCCCTGCGCCGACCGCCCGCATTCACAA
TATATGAATTTCAAAAAAACGCTAACTACATGTCATATAACAAGTTCTGTTCTCCAGACC
AAACACCTGTCGATGCTGAAGGTGGGTCGCAAGCACAAGTTCTCTATGAAGGTGAACACG
GAACAGCATGACCACTGGCTGGTGATGGCGGTGAGGGAACTGTTCCACCTGAGGGTTGAC
GTGGACATACGCACCTGGGGAGTGGATGTTTATGTTGCCTATATTGGGCCCAAGTGCAAT
GCTGCCAAATATACGTATGAGGTTACTGTGCTAGGTCAACACAACGATAGAAAGTTAGTG
TACACACGGGCGACTCACAGCGACCTGGAGAGCTCGTCGCTGAACGTGAGTCGTCAGGAC
TGCTTCCATTTGACTCTGGATCAGGCTTTGAACTTCCTCCGTTTCAAGAACCGTCACTGC
GAACCGGACAAGTTCCTAGACTTCGTGGTCGAAATCAACAAAAGCGAGGCCGCCGTGGAA
AATGTTCGGGTGGAATCGGATTCCTGA
Protein sequence:
MSNRKENIKKSLGLTEYPWSSDDEETLPPCQIATIRPPEIVEPRSTTTLGTSGAGVIPSF
IPVRRNQARLEREVFWSLLNNRRTMIPTESSRPSTSSTSTCENPRPTESIDLNSPVSNLQ
RIFAIKRLTRTLNPNRCPRGNYLNASTISPFSPGVLSPRVTGRLRRRIRPPSDRTSVPAV
MDEENPPIQDEGDESPEIPLMQTIQDNNDNSGEQENSPSNTTAVGIPEVEEIVDIDAEAE
ANSQEGTGDDNQEQASDDEEQNDAIVIYIFYMLFSVETKYTSYDEIEPTTVKEFNQNLLR
LLECPVCLEWMEPPMCQCRRGHLVCGRCRARLAACPVCRTTFSSVRNRAMEAVTELLRYP
CRYGCGRETRLRRRGVHEASCAARRYRCPAPPCADRPHSQYMNFKKTLTTCHITSSVLQT
KHLSMLKVGRKHKFSMKVNTEQHDHWLVMAVRELFHLRVDVDIRTWGVDVYVAYIGPKCN
AAKYTYEVTVLGQHNDRKLVYTRATHSDLESSSLNVSRQDCFHLTLDQALNFLRFKNRHC
EPDKFLDFVVEINKSEAAVENVRVESDS