New model in OGS2.0 | DPOGS208949  |
---|---|
Genomic Position | scaffold675:- 36618-47798 |
See gene structure | |
CDS Length | 3588 |
Paired RNAseq reads   | 232 |
Single RNAseq reads   | 603 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002419 (3e-62) |
Best Drosophila hit   | tusp (2e-78) |
Best Human hit | tubby-related protein 4 isoform 1 (8e-46) |
Best NR hit (blastp)   | Tubby, putative [Aedes aegypti] (0.0) |
Best NR hit (blastx)   | Tubby, putative [Aedes aegypti] (3e-168) |
GeneOntology terms   | GO:0023034 intracellular signaling pathway |
InterPro families    | IPR000007 Tubby, C-terminal IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site IPR015943 WD40/YVTN repeat-like-containing domain |
Orthology group | MCL14775 |
Nucleotide sequence:
ATGGCGCTAATATGCTATCAGGATGGCTTCGTGCTCGTTGGTTCTGTGGCCGGACAGAGG
TACTGGTCTTCGATGCTGTCCCTGGATGCTCGTATTACATGTGGATGCTGGACTCCTGAT
GACAGCCAGGTTTACCTCGGCACTGCATCCGCACAGCTCGTTGTCATGGATGTTCACGGA
GCTATGGTGTCCCAGGTGCAATTAGTAGAAGAAGGCGGTATAACTTCTATGGCTTGGTCT
TGCGAAAAATTTAATATGGAGGAAGGTGAGGAGGTTGGGGAGAATAAAGGCGGGCATGTG
CTGGCTGTAGCTCTTGGCAACGGAGAGATAGTACTATTACGAGGACATGATGACGTCAGT
CCGATCAGGATACACACTGGTGTTAGAGGAAACACATTGGCCATGGAGTGGGCGAATTCT
AGGGAACTGTTGGCCGTTGCTGGCACTTTAATTGCCGAACCAAATGAACCTGAAGACGAA
CCTCCCTTTAAGAACATAGTCAAGTTTTACGCGGACACAGGAGCTCTTATTTACACCGTG
CCCGTCCCTTGTACCCAAGCGCGTGTGACAGCTCTGACGTGGGGTCATGCAGCGCGTCGC
TTATTCGTGGGTGTGGGGGGCTCCGTTTGCACTGCTCGCGTGTGGCGAGTCGTGGCACCC
CTGCAACTGTTGGCACGTGTTCGTGCCGCTGCCGCTCTACGTCACCCGCGCCTCGCTGCC
AAACTGCCTCTACCACCTAGACTGCAGCCCGCTTTAGCGAGTTTATTCGCTCATACCATA
CGGTGCAACGTCCCTGAAGCGAACGAATTACGCCGGTTTGTATCTCGTCCACCGGCCTCC
GGCGGCCGTCTTCACTGCACTATGCTTCGACATGACGATGAGGAGGCGGGTGCTTATACA
CTCTACCTCGAACATCTCGGGGGACTAGTGCCCTTACTCAAAGGAAGGAGGACCAGCAAG
ATCAGACCAGAGTTCGTGATATTCGATCCTCAGGGTGAAGAAGGGGTCCCTCCGCCGCGT
GAGTCAAGCAGCAGTAGCAGCACTAGCGCGTCTAGCAGCAGCGGTGGCGTCCGTGGCTCC
CCCCGCCTGTCCCGGGCTCACGGCTCGCCCCGTTCCCGAGCCCCCCGACCAAGACCCGCG
ACACAACACGACTCTTGCTCCTCGGACACTGAACGAGAGGATGGTTGCTCTGGCTCTCCA
CGCTTACAAAGACGCAGACGAGCTCGAGAACGACGGAAAGCTCGCAATGCCAGTGAAAAA
GATGACACCCCTGATGAATTGGCCTATATAGACTCGTTACCAGAAGATGTACGTCTAGTG
GAAGTAACATCGAACATATGGGGGACCAAATTTAAAATGCACGGTTTGGCCAAAAACGTG
CCGGCGAACCTCGGACAAGTGACCTATAAAACTTCATTACTACACCTCCAACCCAGACAG
ATGACATTGACAATAACAGAACTCAGAGATGACTACCCCGTCGGGCCAGATCCTAATTTC
AATCCGAATATATTTTCCGAAGACGAAGAAGAAGTATTCCAGCCTAGCCAAACAAACTCT
CCGTCACACACTAATAACAATGTTAGAAAAAAAATCAATCCATTAATAATGACTGATAGG
ATGACTAGCACTAATAATATAATAAATCAATCGGAAATATATTCACCCAACAACAACTCA
AACCCCGCTATGGCTAGGGCGGAATCTTACGACGAATTTCCCTTTATAGATACCAACGAA
TCTGTTAACAATGTGACAGATAATGTTTTTAATTCGACTCCTGTTCGACATAGTAACCAG
ACGCCAGAAAGACGTGTCAGCAACACAGCCGGGGTGACCAACCGTCATGCTATATCACCT
TTGAGGTGTGAGGGTTCCGTACCCACATTGCAGTCCCCTAAGAATGCTGTTGCACCGACC
GATATAATTTTCGAGAGGCCCTCGCCTCAGACTGTCACTTGCGGCGGTAGGGGCGACTTT
TGTGGAGGACGCACGGAGTATAGCGTCAGAGATAATGTTGCAATCAAAGGAAATCTACCC
AACATGGACCATCAAGTGACCATAAAGAAGTGCGATAACCATGTGGCCGACAATTGTCTG
TCAAAGTTAAGAAAAAATATATGCAATAGGGGAGAATCGTCATACGAAATTAATACTAAC
AGAATTTTAAAATCTCTCTGTAATAAGAATTTTGAACACGAAGTTCATCCTGACGCCATG
TCTAAAAGATCAGAAACACTTAAAAATTTGCAAAAAGGTGAAGATTTAAAATTTATTGAC
GAAGAGACTCCAGTCGATACGAATATTAATAATTTAACAGATAAAGTTCGAGAAGGTAGA
GTTCAAAGAACGACTACTGTAGTACCCATTAGTCCAGTGTGTGCAAACATTCCCGTATAT
GATACGATGACGCGCAGTTGCAGTGTGGGCTATCTTGACTTGGTCGACCCACAAGTACTA
CATGCTCAAGTCAGCCTGACCGCCTTGAGGGGAGAACCGCCACGTCGCCTGATACTCGTA
AATACGAAACGACAACGACGCCCGAAAAGATACCTTAAAAACGATATGAAACAAATGGAC
AACAAAACACCAAGCCTGAAGAAATGTGGGAAATCGCGGAGCTTGGATTCTGGAGAACTG
ACCATCACAGCAGAGAAAAGTAAACGGCAATCGAAAACGGAGGCGAAAATCAAGCCCGAC
GTCTCCGCCAACTCCAGTAGTCGCTACAACAGTACAGGGGAAGAGGGCAGCGGCACCAGT
ACGGAGGAAGGGCGAACTAGAGGAGGATGCCAGCTTGGGACTAGACCCGCCGGCTCGGGC
ACACCGCCCGCAGCTCGGGCAGCGCCCCCGGCACCCCTCCTCACCGACAGTGATTCCGAC
TACAGCAAGTATTATAGTTCTTTGGAGCAGTTGGCTCTGCGGCTGCTGGCTTCGCGGTCA
TCGAAGCGTGCTGGCGAGGGGATCGCCGGTGGTGTCGCGGGGGTCGCGGGGTCATTATCT
CGCGAAAGCAGCTCCGCACCAGCCTCTCCTCGTCCGGCGCGGGCCACCTCCCCCACCCCC
GCGACACCAGCTCCGAGGACCAGGAGACAGAGATACTCCTCCGCGTCACCGATAAGACAA
TTGCTCAACTCGCCTCTACTAAATAGAAGAAGAAACAAGAAGCTGTCTGAGAGTTCAGAC
GACGAGTACTCGAACGGTTACAACGAAGTTAACAGCAAGAACTACAGAGACCTTGAAAGT
TTCCAGAAGGCACAACTTAGAAATAAGCTAAAACGTGCTGGCGGTAACATGGGCGCGGGT
GGAGGGGCGAGTGCGGGGGGTGCGGGGGAGGTCCGAGAGCGTCGTCAGCTGATGATGCAC
AACAAGGCGCCCATGTGGAACGAGAACAGCCAGGTGTACCAGCTAGATTTCGGCGGACGG
GTCACGCAAGAGTCCGCCAAAAACTTCCAAATTGAGTACCACGGGAAGCAAGTGATGCAA
TTCGGTCGTATCGATGGCAACGCGTACACACTGGACTTCCAGTACCCGTTCTCGTCGCTG
CAGGCCTTCGCGGTCGCGTTAGCGAACGTGACGCAACGGCTCAAATGA
Protein sequence:
MALICYQDGFVLVGSVAGQRYWSSMLSLDARITCGCWTPDDSQVYLGTASAQLVVMDVHG
AMVSQVQLVEEGGITSMAWSCEKFNMEEGEEVGENKGGHVLAVALGNGEIVLLRGHDDVS
PIRIHTGVRGNTLAMEWANSRELLAVAGTLIAEPNEPEDEPPFKNIVKFYADTGALIYTV
PVPCTQARVTALTWGHAARRLFVGVGGSVCTARVWRVVAPLQLLARVRAAAALRHPRLAA
KLPLPPRLQPALASLFAHTIRCNVPEANELRRFVSRPPASGGRLHCTMLRHDDEEAGAYT
LYLEHLGGLVPLLKGRRTSKIRPEFVIFDPQGEEGVPPPRESSSSSSTSASSSSGGVRGS
PRLSRAHGSPRSRAPRPRPATQHDSCSSDTEREDGCSGSPRLQRRRRARERRKARNASEK
DDTPDELAYIDSLPEDVRLVEVTSNIWGTKFKMHGLAKNVPANLGQVTYKTSLLHLQPRQ
MTLTITELRDDYPVGPDPNFNPNIFSEDEEEVFQPSQTNSPSHTNNNVRKKINPLIMTDR
MTSTNNIINQSEIYSPNNNSNPAMARAESYDEFPFIDTNESVNNVTDNVFNSTPVRHSNQ
TPERRVSNTAGVTNRHAISPLRCEGSVPTLQSPKNAVAPTDIIFERPSPQTVTCGGRGDF
CGGRTEYSVRDNVAIKGNLPNMDHQVTIKKCDNHVADNCLSKLRKNICNRGESSYEINTN
RILKSLCNKNFEHEVHPDAMSKRSETLKNLQKGEDLKFIDEETPVDTNINNLTDKVREGR
VQRTTTVVPISPVCANIPVYDTMTRSCSVGYLDLVDPQVLHAQVSLTALRGEPPRRLILV
NTKRQRRPKRYLKNDMKQMDNKTPSLKKCGKSRSLDSGELTITAEKSKRQSKTEAKIKPD
VSANSSSRYNSTGEEGSGTSTEEGRTRGGCQLGTRPAGSGTPPAARAAPPAPLLTDSDSD
YSKYYSSLEQLALRLLASRSSKRAGEGIAGGVAGVAGSLSRESSSAPASPRPARATSPTP
ATPAPRTRRQRYSSASPIRQLLNSPLLNRRRNKKLSESSDDEYSNGYNEVNSKNYRDLES
FQKAQLRNKLKRAGGNMGAGGGASAGGAGEVRERRQLMMHNKAPMWNENSQVYQLDFGGR
VTQESAKNFQIEYHGKQVMQFGRIDGNAYTLDFQYPFSSLQAFAVALANVTQRLK