| New model in OGS2.0 | DPOGS208917 |
|---|---|
| Genomic Position | scaffold675:+ 6538-26771 |
| See gene structure | |
| CDS Length | 2901 |
| Paired RNAseq reads | 1148 |
| Single RNAseq reads | 3213 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002491 (0.0) |
| Best Drosophila hit | CG31158, isoform D (3e-157) |
| Best Human hit | PH and SEC7 domain-containing protein 3 isoform a (5e-91) |
| Best NR hit (blastp) | PREDICTED: similar to arf6 guanine nucleotide exchange factor [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | arf6 guanine nucleotide exchange factor [Culex quinquefasciatus] (0.0) |
| GeneOntology terms | GO:0005086 ARF guanyl-nucleotide exchange factor activity GO:0005622 intracellular GO:0005515 protein binding GO:0032012 regulation of ARF protein signal transduction |
| InterPro families | IPR000904 SEC7-like IPR001478 PDZ/DHR/GLGF IPR001605 Spectrin/pleckstrin-like IPR001849 Pleckstrin homology domain IPR023394 SEC7-like, alpha orthogonal bundle IPR011993 Pleckstrin homology-type |
| Orthology group | MCL11285 |
Nucleotide sequence:
ATGGCTGACGAAAGGCTAGTGGTCCTGAATCGTTGTGACAACTTGGGTTTTGGATTTTCT
TTACTCGGCGAAGCCGGTTTGCCTCATATTATTTACGAAATCGAAGAAAATTCTCCAGCT
GCTAAGAGTGGTGAGGTTGAGGTTGGTGATGTATTGCTCAAGGTCAATGGAACTGATGTC
AACAGGTTCAGCACACGCGAAGTCTTAAAATGCTTACGACTGTCGGCGGATCCTGTGACT
CTTCGTCTCAAAAAAGATCCTCAGATCAAAGCGAACGTGCGACGCTATCTCTCATCCGGC
GAGAGACGTTCTAGCGGGCCGCGTGTCAAACAAGATAAATGTGGATCGCCTCCGTCTAGT
AATTCGAACAGCTCGTCTAGTTCGTCGAACGGTCTAGCTCGGTCTGGCGAGAGCTGCGAG
GCGCTGATCGAGGACCGGTCTGACAGACCGAGACTCACCCAGCCGAAGTTCGAGGCCTAC
ATGATGACCGGTGACCTGATGCTGAACCTCTCCAGGGTTGAACACCCACATCATAATCAC
CACGCGCCCACACACCGCACACACTATCATAGATATAATTCAACCCCAGCCTCCCCTAGT
GAAAACCGTCTAGCTGCTCGTGTGGAACTAACACAGAGGCACAACTCATCACCTAACACC
GGCCTATCGGATCATGCGAGTAAAATGTTCAACTCCCAGCCGGCATCTCCAGCTGGTGGT
AATACCTCATCAGCTGAGTCCGCTACAAGGACCCAGCACATCGTCAGAACATCCAGATCC
GAAGATCACTTACAGAAGGAATCGTCTTTGAGCGCGGTAGCTGTTGATATGGAAGAGGAT
GTGACGTCATCGCTCAATACACTATTGGACGCTCGGCCGGACTCCGCCACGCCAGGACCT
CGCTCGGATTCCGACGAAAGAGACAGGATTGTATGGACGTACAATGCCCCGGTGTCGCAA
TGTAACGGGTCGGCCGCGACATCAAATTCTACCTCCATATCAGATGGGATGTCACAACGG
TCTTCATCCCCGTTGTCGCCAACATCAGCGTCGTGGTCGGCGCTGTCACCACCTCACCGC
GCACCCCCCCTACCACGAGCACCACTCAATGGCGACATGAGTTTATCGGAGGCTGTCTCA
AACATATCCAGCCCCGATTTCCAAGACCAGGACGACATGTTCGAAACGGGTCGGGAGTGT
CCGAGAATGGAACTGTCCGACCCGTCGGACTCGGACTCCACGATACTAGTGTCTGAGCCG
TGTCACAAGAGAGCCAAGTCGAACTCCACGTACTCCACGGAACACGGGAGTGACGTCACC
CTCAACGGCGACCACAGCAAGGAGTACAGAATAGTCATACAGGTCAAAGGTCCGGACAAA
CAGAACAACTCCAACGACAACGTCAACAATAATAATAACACGAATTACGCACAAAATGGC
AAAGAGAACGGGCACAGCTCGCCCGAAAATCAAGGTTATCAGGAGCTGTGCAGTGGTTCG
GACGCTTGTTCTGATGACGGGTCAGACGGTGATTCGCTTCACTCATTCCACTACAGTCCG
AAGGCAGTGGACATACCTTCAGCTGAGAGGCTTGCGAAACGACTATACAATCTAGACGGT
TTCAAGAAATCCGATGTTTCTAGACATTTAAGTAAAAACAATGATTTCTCCCGCGCCGTG
GCGGAGGAATACGTGAAACATTTCGAGTTCGCCAACACTACTTTAGACGAAGCGCTACGA
GCGTTCCTCGCGCGGTTCGCTCTCAGTGGAGAAACTCAAGAAAGAGAACGAGTCTTAGTT
CATTTCTCACGACGGTATTTAGAGTGTAACCCGGGAGCGTTCAATTCACAAGATGCCGTT
CACACGCTCACCTGCGCGATAATGTTACTTAACACAGATCTCCACGGCTGCGGAGGGACG
TTCAGGCGCATGTCGTGCGCCGAGTTCATTGATAACCTGGCTGATCTTAACGACGGCGAA
AACTTCCCTAGAGAAACATTAAAACACTTGTACCACGCTATACGGAACCAACCGCTCCAA
TGGGCGCGCTGGAGAGGAGCTTCGGCAGTACCTGGGACTTGCGACCTAGGTGTAGGTTTA
AGGGCTCCTACCTATGTCGCGTTAAAAGCTCACCTCCATCGCCCGGACTCTGAAGCAACA
AACGAGATTCGGACCGCCCCCGCCGTTGGCAACAATCCGTTCCTCGACTTGCCGGACCAG
AGCCGCGCGGTCGAGTACAAGAAGGGTTATGTCATGAGGAAATGCTGTTACGACGCTAAC
GGAAAGAAAACTCCATTCGGCAGACGTGGTTGGAAGATGTTCTACTGTACGCTGCGTGAT
CTAGTCCTTTATCTGCACAAAGACGAACACGGCTTCCGACGGAGTCAGATGTCAGATAAC
CTGCACAACGCTATAAGAATACATCACGCCCTGGCGACTAAAGCCACAGATTATACAAAA
AAACAACACGTGTTTAGACTGCAAACTGCTGACCAGGCCGAATACTTGTTCCAGACGAGT
GATTCAAAGGAGTTGTGCTCATGGGTGGAGACGATCAACTTTGTATGCGCGTCGTACTCA
GCCGCGCCTCTGGCTGGCGCTGTCGGCTCGCAAAGGAAATTCCAAAGACCACTGCTGCCT
TGTACTCACACCAAACTTTCCATGCGAGAACAGCTAGCGGAGCATGAGGAGCGCGCTGCC
CGTTTAGAGGAGGAATTGGCAGCGTTGAGACTAGCCAGAGATCCACACAGCAGGGACAAA
GATCATTACCTCGTGCACGAGATAAAGAGGTATCGAACATACGCGTATGTGATGCGTACT
CGTGGTGGCGGCATCGGCGCCGAGGAGAACGCGCCCGCGCTGCCCGAGCGTCCTCACAAC
CCTCACCACGCGCCGCCCTGA
Protein sequence:
MADERLVVLNRCDNLGFGFSLLGEAGLPHIIYEIEENSPAAKSGEVEVGDVLLKVNGTDV
NRFSTREVLKCLRLSADPVTLRLKKDPQIKANVRRYLSSGERRSSGPRVKQDKCGSPPSS
NSNSSSSSSNGLARSGESCEALIEDRSDRPRLTQPKFEAYMMTGDLMLNLSRVEHPHHNH
HAPTHRTHYHRYNSTPASPSENRLAARVELTQRHNSSPNTGLSDHASKMFNSQPASPAGG
NTSSAESATRTQHIVRTSRSEDHLQKESSLSAVAVDMEEDVTSSLNTLLDARPDSATPGP
RSDSDERDRIVWTYNAPVSQCNGSAATSNSTSISDGMSQRSSSPLSPTSASWSALSPPHR
APPLPRAPLNGDMSLSEAVSNISSPDFQDQDDMFETGRECPRMELSDPSDSDSTILVSEP
CHKRAKSNSTYSTEHGSDVTLNGDHSKEYRIVIQVKGPDKQNNSNDNVNNNNNTNYAQNG
KENGHSSPENQGYQELCSGSDACSDDGSDGDSLHSFHYSPKAVDIPSAERLAKRLYNLDG
FKKSDVSRHLSKNNDFSRAVAEEYVKHFEFANTTLDEALRAFLARFALSGETQERERVLV
HFSRRYLECNPGAFNSQDAVHTLTCAIMLLNTDLHGCGGTFRRMSCAEFIDNLADLNDGE
NFPRETLKHLYHAIRNQPLQWARWRGASAVPGTCDLGVGLRAPTYVALKAHLHRPDSEAT
NEIRTAPAVGNNPFLDLPDQSRAVEYKKGYVMRKCCYDANGKKTPFGRRGWKMFYCTLRD
LVLYLHKDEHGFRRSQMSDNLHNAIRIHHALATKATDYTKKQHVFRLQTADQAEYLFQTS
DSKELCSWVETINFVCASYSAAPLAGAVGSQRKFQRPLLPCTHTKLSMREQLAEHEERAA
RLEEELAALRLARDPHSRDKDHYLVHEIKRYRTYAYVMRTRGGGIGAEENAPALPERPHN
PHHAPP