| New model in OGS2.0 | DPOGS208425 |
|---|---|
| Genomic Position | scaffold4172:- 1611-8610 |
| See gene structure | |
| CDS Length | 1509 |
| Paired RNAseq reads | 586 |
| Single RNAseq reads | 1673 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009428 (4e-14) |
| Best Drosophila hit | Nup58 (3e-23) |
| Best Human hit | nucleoporin p58/p45 isoform b (1e-16) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (2e-47) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (4e-35) |
| GeneOntology terms | GO:0005643 nuclear pore GO:0006913 nucleocytoplasmic transport GO:0005487 nucleocytoplasmic transporter activity |
| InterPro families | ND |
| Orthology group | MCL14761 |
Nucleotide sequence:
ATGTCTTTCTCGTTTGGTACGCCGTCAAGCGCCCCAGCGACAACAGGTCTTACCGGGGGT
TTTAGTTTTGGCGCTAACAAGCCCGCTACACCTGGTTTTGGGCTCACAGCAACTACTCAA
TCGACGGGGTTATTCGGTACCCCGGCTACAACTGCACCAGCTTTTGGAACCGCAACTGGA
ACTACTCCAGCATTTGGAGCAGCACCTGCTTTTGGTGCTGCAACCCCCGCATTTGGTGCT
AACACTAGTTTTGGGGCTGCAACAAGCGCACCCGCTTTTGGTGCAACAACTTCACTTTCA
TTTGGAGTGTCCAGTGCTGCCCCAGCATTTGGTGCCACAACCTCCTCATTTGGTTCAGGG
ACACCAGCTTTTGGATCTGGAGGTCTCAACTTTGGAACTGGAACAACTTCAGCAGCCACA
AAAGGATTGTCATTTGGCACAACTACAACTAGTTCAGGCTTGGGAGGTTTAGGTGGGTTT
GGTTTTGGTACGACAACTTCAAACTGGTCACTCGGTACAACAGCTACAACCACTACTAGT
GCTTTTGGGAATCAATTAGGAACAATTAATGTAACTGGCACCCAACCGTCTACATCAGCG
GCGCCAAGCCTTGGTTTAGGTGGTATAGCTACATCAGGTGTGACAAACACTACAACAACG
GATGGAAAAAATGAACCACCGATGCAACAGAAGTTGCCGAATGAAATATCAACAACGGTG
GAGTCGTTTAAGGAGTTTGTGAAGAAACAGAAATCATTGAGCTCGGACATCATGAGGATC
TCAATTAAACCGCTGCATAAGGTAAGCCAAGAGGCGGAGACCACGCAACGCGCTGTGGCA
GCTTTACGCGGCGAGTGCGGGAGGGCGCGGGCTCACTGCAAGCGGCTCCGAGCGGCTGCT
GCTGCGGCACTCGCTGCTGCTGAGACCGCCGCCAGGGACGCGCCCGGTACCGACCTGGAG
GGGCCCATACCGCCGCAGTACGTGTCCGAACTGATATCAGAATTGGAACAACAATTGATA
ATGTTTAGACGACAGATGGACGTCGCTGATAAACAGATGCAGTCGTCACCCAAACTACTC
ACTGAACAAGAATTAACACTCGGTATCCGTCGTATGCACGAGTCGTTGGTGGCGTTGGCT
GGGCGGCTTCAAGCGGCACACGCTCTGGTCGCGGCTCAGAAGGAACAATATCTCAACCTC
CGGAAGTACATACTGAAGGATCCCACTGACGTGTTTGATACGCCCACACAAAACGCAAGC
CTCGACCAGATACTCGGTGACGCCGAAGGCACCAGAAAGAAGAAGTCAATTTCAGACTTA
GGTCTCGGAAGCTCTGTCTTGTCTGATCCCAGGGCGCTTTTAGGTAATATTCAAGAATTG
GCTGGACCAACGCCATTTACGTATTTGGGCAACTCAATGTCTTCACTACCTGTCCCAGAT
AATACAGGTAAAGATAATAAAGATCTACGATCTGCCTGTTCACATTTGTCTAATACAAAC
TATGTATAG
Protein sequence:
MSFSFGTPSSAPATTGLTGGFSFGANKPATPGFGLTATTQSTGLFGTPATTAPAFGTATG
TTPAFGAAPAFGAATPAFGANTSFGAATSAPAFGATTSLSFGVSSAAPAFGATTSSFGSG
TPAFGSGGLNFGTGTTSAATKGLSFGTTTTSSGLGGLGGFGFGTTTSNWSLGTTATTTTS
AFGNQLGTINVTGTQPSTSAAPSLGLGGIATSGVTNTTTTDGKNEPPMQQKLPNEISTTV
ESFKEFVKKQKSLSSDIMRISIKPLHKVSQEAETTQRAVAALRGECGRARAHCKRLRAAA
AAALAAAETAARDAPGTDLEGPIPPQYVSELISELEQQLIMFRRQMDVADKQMQSSPKLL
TEQELTLGIRRMHESLVALAGRLQAAHALVAAQKEQYLNLRKYILKDPTDVFDTPTQNAS
LDQILGDAEGTRKKKSISDLGLGSSVLSDPRALLGNIQELAGPTPFTYLGNSMSSLPVPD
NTGKDNKDLRSACSHLSNTNYV