| New model in OGS2.0 | DPOGS210326 |
|---|---|
| Genomic Position | scaffold160:- 317868-321841 |
| See gene structure | |
| CDS Length | 1332 |
| Paired RNAseq reads | 1358 |
| Single RNAseq reads | 3004 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011964 (3e-174) |
| Best Drosophila hit | serine palmitoyltransferase subunit I, isoform A (3e-106) |
| Best Human hit | serine palmitoyltransferase 1 isoform a (2e-93) |
| Best NR hit (blastp) | serine palmitoyltransferase 1 [Culex quinquefasciatus] (2e-122) |
| Best NR hit (blastx) | serine palmitoyltransferase 1 [Culex quinquefasciatus] (1e-119) |
| GeneOntology terms | GO:0017059 serine C-palmitoyltransferase complex GO:0004758 serine C-palmitoyltransferase activity GO:0009058 biosynthetic process GO:0016769 transferase activity, transferring nitrogenous groups GO:0030170 pyridoxal phosphate binding |
| InterPro families | IPR015424 Pyridoxal phosphate-dependent transferase, major domain IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 IPR004839 Aminotransferase, class I/classII |
| Orthology group | MCL12320 |
Nucleotide sequence:
ATGATTTTAATGGACATATACGATACTGCGAGTTGGTGGACATTAGTAATTGCAGCCCAA
GTGGTTATCGGCAGCGCGTACTTCTTGTGGACTAAAAAGAAGAGAGAACCGGAAGATAAG
TTGACTTATAAAAAGTTCAATGAATGGAAACCTTTACCTCTTGTAGAATACGACCTGAAA
GTTGATGAGCCTCCATTGATGGGTAAAATTGACGAAAATGTTCTCAATGTTGGCGCTACT
AGTTTTCTGAATTTTGATAAGGAGCCCCAAATAATGGAAAATGCTATTGCATCCCTCCAT
AAATATGGTGTAGGATCATGTGGGCCGAGAGGTTTTTATGGCACAATTGATGTGCATCTG
GAACTTGAAGAGAGATTGGCAAAGTTTTTGCAGGTTGAAGAGACTTGTGTGTATTCATAT
GGATTTTCCACCATGGCCAGCGCCATACCAGCCTATGCTAAGAAAGGGGACATCATATTT
GCAGATGAGAAGGTCTGGTTCGCAATCCAGAAAGGCATAGAAGCGTCCCGCAGCAATGTT
AAATACTTCAAACACAACGACATGAAGGATTTAGAAAGGTTGCTCGAGGAGGGCGTCCAG
AAAAAGGAATTGCATCCTAAGAGACGTGCGTTCCTGATCGTTGAAGCAATATACTTTAAT
TCTGGTAAAATGTGCCCTTTGAGGAAGGCTGTGGAACTGGCGAGGAGGTACAAATTAAGA
ATCATGCTGGACGAGAGCTTGAGCATTGGTGTAATAGGTAAGAACGGCCGCGGTCTGACC
GAACACTTGAACGTGCCTCGTGATGAAGTGGATCTCATCATGGGCTCGCTGGAACACTCG
TTCGCCACCATCGGCGGCTTCTGCGCTGGGACGCACTTCATCGTAGAACACCAAAGGCTA
TCAGGCCTAGGGTACTGTTTCAGCGCGTCCCTTCCACCTATGCTAACAGAGGCGGCCATC
ACCGCCCTGGATATACTCGAGTCCCAACCAGTCGTGGTTAAGGAGTTGGACGAAGTGTCC
GTTAAGTTGAACAAGGCCCTCGACAATCTGAAACACTACACATATAGCGGGGATGAATTG
TCACCTGTAAAACATGTTTACCTCAAAGATGATATGTCTCACAATGATAAAGAATCATAT
CTCAAGAAGATAACCAAGTACTGTATGGAGAAAGGCATAGCTATGACGACAGCTGCCTAC
CTTAAAGACCAGGAGGTCAAATGTCCGGAACCTTCCATACGCTTGGCCTCAAATAGAAAA
TTAACTGATGACAATATAAAGCAGATCTGCGAACTTTTGGATGAGGCCTATGAAAGAGTT
GGTCCTAAATAG
Protein sequence:
MILMDIYDTASWWTLVIAAQVVIGSAYFLWTKKKREPEDKLTYKKFNEWKPLPLVEYDLK
VDEPPLMGKIDENVLNVGATSFLNFDKEPQIMENAIASLHKYGVGSCGPRGFYGTIDVHL
ELEERLAKFLQVEETCVYSYGFSTMASAIPAYAKKGDIIFADEKVWFAIQKGIEASRSNV
KYFKHNDMKDLERLLEEGVQKKELHPKRRAFLIVEAIYFNSGKMCPLRKAVELARRYKLR
IMLDESLSIGVIGKNGRGLTEHLNVPRDEVDLIMGSLEHSFATIGGFCAGTHFIVEHQRL
SGLGYCFSASLPPMLTEAAITALDILESQPVVVKELDEVSVKLNKALDNLKHYTYSGDEL
SPVKHVYLKDDMSHNDKESYLKKITKYCMEKGIAMTTAAYLKDQEVKCPEPSIRLASNRK
LTDDNIKQICELLDEAYERVGPK