DPGLEAN15103 in OGS1.0

New model in OGS2.0DPOGS210329 
Genomic Positionscaffold160:- 275358-280739
See gene structure
CDS Length1617
Paired RNAseq reads  719
Single RNAseq reads  1722
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA011966 (0.0)
Best Drosophila hit  CG6550 (0.0)
Best Human hitCDK5 regulatory subunit-associated protein 1-like 1 (0.0)
Best NR hit (blastp)  hypothetical protein TcasGA2_TC011523 [Tribolium castaneum] (0.0)
Best NR hit (blastx)  hypothetical protein TcasGA2_TC011523 [Tribolium castaneum] (0.0)
GeneOntology terms


  
GO:0005575 cellular_component
GO:0003824 catalytic activity
GO:0051539 4 iron, 4 sulfur cluster binding
GO:0009451 RNA modification
InterPro families






  
IPR020612 Methylthiotransferase, conserved site
IPR006638 Elongator protein 3/MiaB/NifB
IPR023404 Radical SAM, alpha/beta horseshoe
IPR002792 Deoxyribonuclease/rho motif-related TRAM
IPR013848 Methylthiotransferase, N-terminal
IPR007197 Radical SAM
IPR005839 Methylthiotransferase
IPR006466 MiaB-like tRNA modifying enzyme, archaeal-type
Orthology groupMCL14131

Nucleotide sequence:

ATGCCAGGTGCCGTATCGGAGTTTATTGATGATATTGAGGATTTAATATCTTCACAGGAT
ATCACACCAAAAGAAAGATACGCCAGTAGGAAAAGTGTAAGCGTCCGGTCAAAAAAGAAA
GAAAAAAAGGAGACGGAATGTGTTGAGAAGGTTATTTTGGAGAGTGTTGTACCAGGAACT
CAAACAATTTACGTGAAGACATGGGGCTGTGCACACAACAACTCGGATTCAGAGTATATG
GCAGGTCTACTGGCTGCACATGGCTACAAACTGACGGAAGACAAGTTTTCTGCACAGCTA
TGGCTGCTGAACTCTTGTACTGTGAAGAGCCCTGCTGAAGACCATTTTAAGAATGAGATT
GAACTGGCTCAGAAGCGCGGTATCCACTTGGTGTTAGCCGGATGTGTGCCGCAGGGAGCA
CCACGCTCGGGATATCTTGCGGGACTGAGTGTGGTCGGAGTACACCAGATTGATAGAATC
GTTGAGATCGTTGAGGAAACATTGAAAGGTCACACAGTGCGTCTTTTTGGTCAAAAGAAA
ACGGAGGAGGGTCGGAAGGCGGGCGGGGCTTCTTTGTTGCTCCCGAAAGTGAGGAAAAAT
CCCCTCATAGAGATCATACCGATAAATACAGGGTGTTTGAACCAGTGTACATACTGTAAA
ACGAAACACGCGAGGGGCGAGCTGGGGAGTTATCCTCCAGAGGAAATAGTCGAGAGGGCG
ACACAGTCTTTCAAGGAGGGAGTGTGCGAAATATGGCTGACTAGCGAAGACACGGGAACA
TACGGTCGGGACATAGGCACGTCCCTCCCATACCTCCTCAAACAGCTGGTGGCCGTCATT
CCTGAGGGCTGTCGTCTTCGCCTGGGTATGACGAACCCGCCCTATATCCTGGAGCACCTG
GCCGAGGTCGCCGAGATCATGCACCATCCCAGGGTATATAAGTTCCTCCACGTGCCGGTT
CAGTCCGGGAGTGACCAGGTGTTGGCCGACATGAAGAGGGAGTACTCCAGGAAGGACTTC
GAGAGGGTCGTGGACTACCTCGCAGAGAGGGTCCCCGGGATCACGATAGCCACGGACATC
ATCTGCGGGTTCCCGACGGAGACGGACGCGGACTTCGAGGATACCATGCAGCTCTGTATG
AAGTATCGCTTCTCATCGCTCTTCATCAACCAGTTCTTCCCTCGCCCGGGCACGCCGGCC
GCTAACATGACACGAGTCCCGCCTCAAGACGTCAAGAAAAGGACGAAGAAATTATCGGAA
TTCTTCCGCTCGTATGAACCTTACGGTCACAAGGTGGGCGAGATACAGGAGGTTCTGGTG
ACGGATGTGTCCCACGACAAAAACTATTACGTGGCACACAACGAGTTCTACGAACAGGTG
CTGGTGCCCAAGGAGGAGAGATACATGGGGAAGCTGGTTACGGTCAGAATAACGAGCGCC
TCGAAGTTCTCCATGATGGGACACCCTGTAGATAAACCCAAAATGCCCGGCTTAGTGAAA
CCGTTGAAGAAAGGGGAAGTGTCGGGTTATTGGAAACAAAGCAAGGCCTCGCTTCCTGTG
CCCATACTTATGTTACTAATAGCCGTCGTCGCACGCTTGTTATGGATGTTTATATAG

Protein sequence:

MPGAVSEFIDDIEDLISSQDITPKERYASRKSVSVRSKKKEKKETECVEKVILESVVPGT
QTIYVKTWGCAHNNSDSEYMAGLLAAHGYKLTEDKFSAQLWLLNSCTVKSPAEDHFKNEI
ELAQKRGIHLVLAGCVPQGAPRSGYLAGLSVVGVHQIDRIVEIVEETLKGHTVRLFGQKK
TEEGRKAGGASLLLPKVRKNPLIEIIPINTGCLNQCTYCKTKHARGELGSYPPEEIVERA
TQSFKEGVCEIWLTSEDTGTYGRDIGTSLPYLLKQLVAVIPEGCRLRLGMTNPPYILEHL
AEVAEIMHHPRVYKFLHVPVQSGSDQVLADMKREYSRKDFERVVDYLAERVPGITIATDI
ICGFPTETDADFEDTMQLCMKYRFSSLFINQFFPRPGTPAANMTRVPPQDVKKRTKKLSE
FFRSYEPYGHKVGEIQEVLVTDVSHDKNYYVAHNEFYEQVLVPKEERYMGKLVTVRITSA
SKFSMMGHPVDKPKMPGLVKPLKKGEVSGYWKQSKASLPVPILMLLIAVVARLLWMFI