| New model in OGS2.0 | DPOGS210338 |
|---|---|
| Genomic Position | scaffold160:- 40129-47778 |
| See gene structure | |
| CDS Length | 3768 |
| Paired RNAseq reads | 2993 |
| Single RNAseq reads | 7198 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011979 (3e-13) |
| Best Drosophila hit | ND |
| Best Human hit | serine/threonine-protein kinase SMG1 (2e-58) |
| Best NR hit (blastp) | PREDICTED: similar to PI-3-kinase-related kinase SMG-1 [Apis mellifera] (1e-170) |
| Best NR hit (blastx) | PREDICTED: similar to Serine/threonine-protein kinase SMG1 (SMG-1) [Nasonia vitripennis] (3e-124) |
| GeneOntology terms | GO:0005488 binding |
| InterPro families | ND |
| Orthology group | MCL10658 |
Nucleotide sequence:
ATGCGTCGCGGCCGGGAGACCCTCCTCACACTGCTGGAGGCGTTCGTGTACGACCCTCTG
GTGGAGTGGGGTGGTGGGCGTCGTAAGCGCGGAGCCCGCCACGTGCGGGCAGCCAAGGCC
ATGCTTGCGGTTCGCGTGAGGGAATTGAAACACTCCGCCACCGATATCACAAATCAGCTG
TTGGCCGCACTACCTGAAGTAAAGCACTGTGCGGATAAGTGGTTAGAAGAAAACGAACAG
TTACATACTGTGGAGGAAAAACTTGACATGTGTCATAAACAGATGGCCCTCATCAAAGAG
GTCGAGGCGTGCGGCAGCAACCTCAGCGACCATCCTCTGTATGCCATCTCACAGAAATAT
ACGTCACATAAACAGGCCAAAAACGCGGTCGAGGACTCGATGAAAGCTCTCGTAAAAATC
CTCAACGACTTCGATACTCAGATAGAAAGTTTTGCAAACACTAATGACATATTGAACGGG
CCGCAGTTGATGACCTGGGTGCAAGAGTTCTCGGGGCCTCATTACGACGACGAGAAACCC
ATATTCGAACCCATAAAAGAGTTTTTAACCAACGCCGGAAAAGGTTCCATGATATCACAA
TTCGAACAGGCGGAAGTAGAGTTGAACCAGACCATGCAGCAGACAAACCTACTGGTGAGG
TCCTGCCTCGAGCTGTTGACACAGTACGTGGCCGTCTCTCAGTACTATCCACAGAGTCGG
ACGGAATACCACCGCTTAGTGATGTTCCGCAAGTACCTGGCGACAGCTTTAGAAAGTAAA
TCCCCGGAGGTCTGTCGGGAGGTGGCCGGCCAAGTCACGGCTCTGGTGGAGTCGGACAAC
GTCACCGGTGACTCGCAGCAAATTATCGCTTACAACTATCGTTTACACCAAGTCAACGCG
GAGGCGAACGCGTACCTCAACAAATGCCACGAAAGATTGCAACTAGAGGGCGGGCCCGAC
GCCATCGCTCTGGCACAAGACAGCTACATGGAAGCGAAAAATAATATAAACAACTGGCTG
CGAACGGAAGAGGGCGCCGGAGCGGCTCTGGAGAACGCCGCTATCGGGATGCTGTGTAAT
TTGAACAGGAGATATCTAATGTTGGAGAACGGCGCACAGAGCGCAGGAGACTGCCTACTC
GACCTAACGTCCAGGGACGGGGAATGGTTCCTGGACGACATGAACTCGCTGTCGATGCAG
GCCATCGAGTTGCTGACTCTGCTGCCCTTGCCTTCGACCACGGCGGACGACGCCGCCCTG
TCAGTGGCCGTGGAATGTGTCAAGAATGCTAATCTTCTAATAGCTGACTTGGTTCAACTG
AACTACAACTTTAGTACAATCATTTTACCAGAGGCCGTTAAGAAAGTGCACTCCGAGGAT
CCCTCGACCTTGCACATGATAAACGAACTGAACGCGCTCATCACCAACACGCCCGTGACC
CTCAACGACCTGCTCACACAACTCGAAATGCACTTCCGCTATCTGGTGATGGACATGGAG
TCCCCAGCTGCCGGTGCACAAATACTAGCGGCCGAGCTCCGTAGTCGCTACGAGGAGCTC
TTGTCTCCGTCGGAGGGCGAGGCCCCGGGACAAACCCCAGGCCGCATGTTGCTGATGGGG
TTCAGCGGACTGTTCGCGGCCGTGGAGCTCCGAGCGAGGGAGCTGGCCGACCACCTCGCC
GCCCCGCTGCAGCCCGCCTGGAGGAAGATCGACCAGATCAATGACGCCATGCACATGTCG
GCTGCCATGCAGAATCCCGCGCTGCGCTCCGTGCTGGAGGATATCTTCACGGTGCGGCGC
GTGCAGACCGTGGCGGAGGTGTTCTCTCTGTGCCTGCAGCTCGCCCGCGCCTTCCGCGGC
TCTCCCCCGCCCGCCGCGCCTCCTCCGCCCCCCGCCGCCTCACAGCCCCTCCTGGACGAC
GCCGCGCTGTGTAAACCAGTCAGACGTTTTACGGCGGAGTACGTGTCCCGCTGTTTCCTG
GGCGTCCACTCCCTGTCTCTGGGCCGCGCGCTGTGCCTCCTGCTGCGGCGGGCGCGGCTC
GATCTGCGCGCCGAGGTCGAGCAGAAGGAGATCGGCGCCTCCTGGAGCGTGTCCCTGGAG
TCTCTGGTGGAGAAGGCCTGCGGGTCCGTGTCGAGTCGCGCGGGGTCCCTCGCCGGAGCC
TTGCAGGCGTCCCGGGCCCGCACGCTCCGCGCCGCCGCCGCCGTGCGCGCCCTGGACCGT
GCCCGCGCCTCGGCTCGCGCCGCCCGTCTGCGCGCCGCCGCCCACGCCAGTCTACACGCT
GAAATCGTGTCCGGAGCCCCCGAACCAGGCCCGGCGTTGTTCCGCGCGGCCCGGGACCTC
ACCGCCGCCCGGGGACGACTAACTGACGCCTTGGAGAAGGCACAGGCTCTCCTCACACCC
GCACATCAGAGTAAAGTGGGGCGCGGGGCGAACCCCGACCTGCTGGGGGCGGTGGTGGCG
CTAGAGTCGGGCTGGGCGGCGCGGGCCGGGAGGGCGCATGCTCTGTGTCGCGCAGGGGCC
GTGCTGGCGCCACACGCGCGCTCCGCCTCCGCCCTGGCCGCGGCCAGGCCCGCGAGACAC
GCCAGGGCCCTGCGACACGCCCGCACGCTCAGGACCGCGCTCGCGCACTGGGAGAAGGCG
TGTACGCTCGCTCAGAAGTACTCGCTGCACGTGTCGCCCGTCGAGGAGTCGCTCATGGAG
ATGCTGCACCCCGAAGGAAACATCGACACACACTGGGTGGGAGACGTGTCGGCGCTGGTC
CAGGATACGCTAGGATCCCGGGCGTCGGCCGCCAGCTCAGCGCGTGCCCGCCTGAGCGTC
GCCAGCGACGCCCTCAGCGCCGCCGCCGCCCGCCTCAGGGACGCAGCCGCCGCCCGGGAA
CATCTGCTGCACGACCTGGCCGGGCCGCTGCACGCGCTCGCCCCCTACAACGAGGGTGAC
AATCCGTCCCAGGAGTTCCTGTCTCTGTGGCGCGCGGTGTCCGAGCGCCTGGCGGCAGTC
TGCGGCCTCCTAGACCTTGACCTGGACCTGGAGCGCGTCGCTCGGACAGCTGCAGAAACA
CACGCACTGCTCACAGACCTGCCGCTGCTGCTGGATATGATGCTCCAATTGCCCGGAAAC
ACGGACACGAGCCGGCGACTCACGCGGCAGGCGGCCGTCGGCAGACCGCCCGCCAGGCAC
GGTGGAGTACATTATATCGGAAGCGACCAGCGCGGACAACCTCTGCCTCATGTACGAGGG
CTGGATGGCGTGGGTGTGAGTCCCGGGCGGTGCTCCGCCCTTCGCCGTGTGCGGACGGGC
GCTCCCGTGCCGTTCGGCCCGCGGGCGCCCTCCCGAGAGCCCCACGAGCCGGACCGAAGC
CCCCGGGCTCGGCCCCGACGACGACGTCAGCTACGGAAGACACCCCGCACGGGGAACTCT
CCGTATCACGATTCGATGTTAGATTTAAAGTATCGCGACTCCGACGACGACTCGCGCGTT
CTCCAGGAGCCGCCGAGGCCCAGGCTCCCTCCACCAGCACAGGGACACGCTCCCGGCCGA
GCGACGTCGACTCACGGATCGTCTTCATTGAAATATTCATATATATGTATCTCAGCTACC
GAGTATGTTGTAAGGTTACCGTGTTTGGACCCCAGCTTGTTTTCTCCACGCGACCATCGC
TCTCCCCCGCTCCCTCGGGCTGCCGGTCATCCATTCATCGCCTACGAATATATTTTACTA
AAGGAAACTTTCTCTGCACGATACAATACTAAAGAAGGCTCGAGTTAA
Protein sequence:
MRRGRETLLTLLEAFVYDPLVEWGGGRRKRGARHVRAAKAMLAVRVRELKHSATDITNQL
LAALPEVKHCADKWLEENEQLHTVEEKLDMCHKQMALIKEVEACGSNLSDHPLYAISQKY
TSHKQAKNAVEDSMKALVKILNDFDTQIESFANTNDILNGPQLMTWVQEFSGPHYDDEKP
IFEPIKEFLTNAGKGSMISQFEQAEVELNQTMQQTNLLVRSCLELLTQYVAVSQYYPQSR
TEYHRLVMFRKYLATALESKSPEVCREVAGQVTALVESDNVTGDSQQIIAYNYRLHQVNA
EANAYLNKCHERLQLEGGPDAIALAQDSYMEAKNNINNWLRTEEGAGAALENAAIGMLCN
LNRRYLMLENGAQSAGDCLLDLTSRDGEWFLDDMNSLSMQAIELLTLLPLPSTTADDAAL
SVAVECVKNANLLIADLVQLNYNFSTIILPEAVKKVHSEDPSTLHMINELNALITNTPVT
LNDLLTQLEMHFRYLVMDMESPAAGAQILAAELRSRYEELLSPSEGEAPGQTPGRMLLMG
FSGLFAAVELRARELADHLAAPLQPAWRKIDQINDAMHMSAAMQNPALRSVLEDIFTVRR
VQTVAEVFSLCLQLARAFRGSPPPAAPPPPPAASQPLLDDAALCKPVRRFTAEYVSRCFL
GVHSLSLGRALCLLLRRARLDLRAEVEQKEIGASWSVSLESLVEKACGSVSSRAGSLAGA
LQASRARTLRAAAAVRALDRARASARAARLRAAAHASLHAEIVSGAPEPGPALFRAARDL
TAARGRLTDALEKAQALLTPAHQSKVGRGANPDLLGAVVALESGWAARAGRAHALCRAGA
VLAPHARSASALAAARPARHARALRHARTLRTALAHWEKACTLAQKYSLHVSPVEESLME
MLHPEGNIDTHWVGDVSALVQDTLGSRASAASSARARLSVASDALSAAAARLRDAAAARE
HLLHDLAGPLHALAPYNEGDNPSQEFLSLWRAVSERLAAVCGLLDLDLDLERVARTAAET
HALLTDLPLLLDMMLQLPGNTDTSRRLTRQAAVGRPPARHGGVHYIGSDQRGQPLPHVRG
LDGVGVSPGRCSALRRVRTGAPVPFGPRAPSREPHEPDRSPRARPRRRRQLRKTPRTGNS
PYHDSMLDLKYRDSDDDSRVLQEPPRPRLPPPAQGHAPGRATSTHGSSSLKYSYICISAT
EYVVRLPCLDPSLFSPRDHRSPPLPRAAGHPFIAYEYILLKETFSARYNTKEGSS