| New model in OGS2.0 | DPOGS210362 |
|---|---|
| Genomic Position | scaffold160:+ 106298-107175 |
| See gene structure | |
| CDS Length | 792 |
| Paired RNAseq reads | 148 |
| Single RNAseq reads | 595 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011919 (6e-44) |
| Best Drosophila hit | CG9107, isoform B (1e-35) |
| Best Human hit | ribosomal RNA-processing protein 7 homolog A (5e-33) |
| Best NR hit (blastp) | rRNA processing protein RRP7, putative [Ixodes scapularis] (1e-50) |
| Best NR hit (blastx) | GK15401 [Drosophila willistoni] (1e-39) |
| GeneOntology terms | GO:0003676 nucleic acid binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL11471 |
Nucleotide sequence:
ATGAAGTCGACGAAAAAAACACACGACTTCAAAGCACTGGATCTGAAGGTCAATAAAGAT
TCAGTATCTCCCCATGTCATTTATTTTAAAGAACACACAGTCAGAGAACATACCTCCGAT
AAACCTTCAGGACGCACATTATTTATAATCAACGTGCCGCCTTATGCCGATGAGAGGGGT
TTGGCCAATGCATTCCGTGAAGCTGGAAAAGTAGTGTCAGTGATTTTGACATCGAGACCT
AATTCATCAGAAACAAAAATTGATACATTCTTAGGTGAACCTACAAAATCGGGGTCATTT
AAAGTATGTTATTTAGTATTTAGTAAAGTAGCCGATTTAGATAAAGCACTTAAACTAACC
GAACTGCAGCCTATGAACTCAAGTGAACATCAAATCAAAGTCGGTATATCAAAATGGTTA
GATGAGTACAATAATTCTATACAACATCCTAAAGCCTTGAAGTCTAAAATAGAATCTTTT
ATGCAAGACTATGATAAGAAAATGGCTTCGCAACAGGAGCAAGAGAAGGAGTTAGAAAAA
GAAGATGATGAAGGATGGGTCACAGTCACTAAGGGAGGAAAAATACAAAGCTTTGCCAGG
ACCGAAAAAGTTAAAAATAAAATAATGGAGAAAGAAGAAAAGAATAAAAAGAGAAAAGAA
TTGAAGAACTTCTACACCTTCCAAATCAGAGAGTCCAAGATGAAACACATAGTGTCCTTA
CGACAAAAGTTTGAGGAAGACAAGAAGAAAATAGCACAAATAAAACAAAGTAGAAGATTT
AAACCATTTTAA
Protein sequence:
MKSTKKTHDFKALDLKVNKDSVSPHVIYFKEHTVREHTSDKPSGRTLFIINVPPYADERG
LANAFREAGKVVSVILTSRPNSSETKIDTFLGEPTKSGSFKVCYLVFSKVADLDKALKLT
ELQPMNSSEHQIKVGISKWLDEYNNSIQHPKALKSKIESFMQDYDKKMASQQEQEKELEK
EDDEGWVTVTKGGKIQSFARTEKVKNKIMEKEEKNKKRKELKNFYTFQIRESKMKHIVSL
RQKFEEDKKKIAQIKQSRRFKPF