| New model in OGS2.0 | DPOGS210368 |
|---|---|
| Genomic Position | scaffold160:+ 169200-170210 |
| See gene structure | |
| CDS Length | 1011 |
| Paired RNAseq reads | 115 |
| Single RNAseq reads | 656 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011925 (8e-157) |
| Best Drosophila hit | Netrin-A (3e-88) |
| Best Human hit | netrin-1 precursor (4e-93) |
| Best NR hit (blastp) | PREDICTED: similar to netrin 1a [Apis mellifera] (5e-123) |
| Best NR hit (blastx) | PREDICTED: similar to netrin 1a [Apis mellifera] (2e-126) |
| GeneOntology terms | GO:0005515 protein binding GO:0005578 proteinaceous extracellular matrix GO:0016358 dendrite development GO:0001569 patterning of blood vessels GO:0016525 negative regulation of angiogenesis GO:0001525 angiogenesis |
| InterPro families | IPR008211 Laminin, N-terminal IPR002049 EGF-like, laminin |
| Orthology group | MCL10573 |
Nucleotide sequence:
ATGCCCGCCCGCGCCGTGGCCCTGCTCGCCACCGCGGCCCTGGCCCTAGCGGCCGCCCCG
CCCGACCCCTGCTATGAGGACACTCGGCCTCGTCGGTGCATTCCTGACTTCGTCAATGCT
GCCTTCGGGAATCCGGTCGTCGCTTCCTCCATATGCGGAAGACGAGGTCCCGAAAAACTC
TGCGACCCTCCCGGGGATCAGAACCCTGAGAACTCATGCAGGGTCTGTGATGCCACTCGC
CAAGATAAACGGAATCCCCCCGCTCATTTGACCGATCTGAACAATCCCCACGACGTAACC
TGCTGGAGATCAGCCGCTCTTCCTCCCGCGACCTACGACTCACCCCCTGATAACGTTTCC
CTCACTCTGTCCCTTGGCAAGAAGTACGAGCTGACCTATGTCAGCTTGCAGTTCTGCCCG
AAAGCTGCGAGACCTGACTCCGTGGCCATCTACAAGAGCGCCGACTATGGTGTCACTTGG
CAGCCATTTCAATTCTATTCTAGCCAATGTAGACGAGTCTACGGACGGCCGAATAAAGCC
ACGGTGACCGCTGCTAACGAACAAGAAGCTAGATGTTCCGATTCTCATAGATTGGCCGGT
GAGAGTTCAGGGGGTGCGAGATTGGCCTTCAGTACATTGGAGGGTCGCCCCAGCGCCGCC
AACTTTGACATATCTCCGGTGCTGCAAGACTGGGTTACGGCGACCGATGTAAGAGTCGTG
TTTAACCGACTGCACATGGTGAACGAGGGTGATGAGGTCGACAGTAAAAAGCAGTCGGCC
GCTGGAAGCCAGCACTACGCGGTCTCCGACTTCGCTGTCGGCGGGAGGTGCAAGTGCAAT
GGACACGCGTCCAGGTGCATCCCTTCCAAGGACGAGGGTCAGGGGACTCAGCTGGCCTGC
GACTGTAAACACAACACCGCAGGAAGAGACTGCGAGAGGTGCAAGCCGTTCCACTTCGAC
CGGCCGTGGGGGCGAGCGACGGCCCGCGACGCTAACGAATGCAAAGGTTAG
Protein sequence:
MPARAVALLATAALALAAAPPDPCYEDTRPRRCIPDFVNAAFGNPVVASSICGRRGPEKL
CDPPGDQNPENSCRVCDATRQDKRNPPAHLTDLNNPHDVTCWRSAALPPATYDSPPDNVS
LTLSLGKKYELTYVSLQFCPKAARPDSVAIYKSADYGVTWQPFQFYSSQCRRVYGRPNKA
TVTAANEQEARCSDSHRLAGESSGGARLAFSTLEGRPSAANFDISPVLQDWVTATDVRVV
FNRLHMVNEGDEVDSKKQSAAGSQHYAVSDFAVGGRCKCNGHASRCIPSKDEGQGTQLAC
DCKHNTAGRDCERCKPFHFDRPWGRATARDANECKG