New model in OGS2.0 | DPOGS207182  |
---|---|
Genomic Position | scaffold7:- 395973-423920 |
See gene structure | |
CDS Length | 1374 |
Paired RNAseq reads   | 56 |
Single RNAseq reads   | 193 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | serotonin reuptake transporter [Caenorhabditis elegans] (2e-06) |
Best NR hit (blastx)   | Modulation Of locomotion Defective family member (mod-5) [Caenorhabditis elegans] (8e-08) |
GeneOntology terms   | ND |
InterPro families   | IPR000175 Sodium:neurotransmitter symporter |
Orthology group | ND |
Nucleotide sequence:
ATGGTCGGTTGGGTTTTTCCCACAGCTGCGGGCACAGATGTGCCCACAGGTGAAGATAAA
GGTATGCCCGCAGGTGCGTATCAAGCTGCGCCGGCAGCTGCGGGTGACGTCACTACTTTA
TTCGGTATAGGCGCTTTCAGCGACTTTGCCGCCTTCCTCTTTTCCGATTTGGATGACGGG
CCTGTCCCGTCGTTATCCTCCTCGGCGTCCGAGGTCAGCGAAGAAGTCTCCGATGACGAG
TCGTCTTCGGAGCATTCCATATCGGATGGAATGCTGGGTTGTAGGCATCCCGGTGAAGCC
GGGCTGATCAACAAGGGAATAAATCTAGTGACCGACCCTTTCGGAGTAGGCCTCATCGGG
GTATATGATTTTGGGACCATGTCTCCTTTCACGATGGTTGACAACGCAGTGTTAATTTTC
GCAATGGTGTTTATTGCTATGGCCTTCGCAAGATCTCTCATAGTACGAGTGCTGTATTTG
AAACTTACTGAATGTGTTAAAGTAGACCTGGCCGAGTCGCCTCACTACCTTTTATTCGCA
ATTCTGCCTTTGAGTACGGAATTTATGGATGCTCACAAGATCTTCGTGTTGTACATTTAT
CTGTACATGATGGCTGCATTAGTGGCATATCTGGCAATGTTCACATCGACGATGTCAAGG
CTACTTCACAGCGAATTCTGTTCCGTCAAAACAATTTATATAATTGGATTGGTCTGCTTT
TTAGGTTTCATCCAATCATTGCCATTGACCTTGTATTCTGGCGACACTATGGGCTTATTC
TTTGGCCTCAATACATGTACCTTATCTCTGGGCGCCATTAAGGTGGCCATAGTCATGTGG
GTATATGGAGTCCAAAAGTTTTCAACAGATATACAATTTTGGCTTGGTTTTGAGCCTACA
AGCTTCTGGCAGAATTTATGGACAGTCCTTCCATTATTCCTTACTGGCTTTGCTTTGCAA
CATATTAAGGATTTAATAACTTTTAAGCAAATAGGCCAAATCTATACCGCAATGTTTTGG
TCTTTGATAACGTTTCTGGTTGTAATCATTTGCATGTTAAAAGCCGTGGCGCAGTGTATT
GTAAAAAATAATTTAGCTGGCATACTTAAAAGTAGTTATAAACACGGTCCCCCGGAGATC
GAAGATAGAAAGAAAAGAAGGAATTTTGACAAGGTTGCACAAAATAGAAAATGTAAACAT
AATTGCCTTATACTTGATGAAACTTTCGACTGCAATCATTTGCCGTTAACATTTAGGAGA
AAATCAAACATAAATAATGATTCTTTGACTAATATATACGAGGCCGGACCGTCAAATGAA
AGACACAGAACATCGAGTGTTTTAGATATTGCTAATTTAGATGCGCAAAAATAA
Protein sequence:
MVGWVFPTAAGTDVPTGEDKGMPAGAYQAAPAAAGDVTTLFGIGAFSDFAAFLFSDLDDG
PVPSLSSSASEVSEEVSDDESSSEHSISDGMLGCRHPGEAGLINKGINLVTDPFGVGLIG
VYDFGTMSPFTMVDNAVLIFAMVFIAMAFARSLIVRVLYLKLTECVKVDLAESPHYLLFA
ILPLSTEFMDAHKIFVLYIYLYMMAALVAYLAMFTSTMSRLLHSEFCSVKTIYIIGLVCF
LGFIQSLPLTLYSGDTMGLFFGLNTCTLSLGAIKVAIVMWVYGVQKFSTDIQFWLGFEPT
SFWQNLWTVLPLFLTGFALQHIKDLITFKQIGQIYTAMFWSLITFLVVIICMLKAVAQCI
VKNNLAGILKSSYKHGPPEIEDRKKRRNFDKVAQNRKCKHNCLILDETFDCNHLPLTFRR
KSNINNDSLTNIYEAGPSNERHRTSSVLDIANLDAQK