| New model in OGS2.0 | DPOGS207184 |
|---|---|
| Genomic Position | scaffold7:- 359805-365590 |
| See gene structure | |
| CDS Length | 1425 |
| Paired RNAseq reads | 34 |
| Single RNAseq reads | 103 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013690 (3e-169) |
| Best Drosophila hit | resistant to dieldrin, isoform A (1e-160) |
| Best Human hit | gamma-aminobutyric acid receptor subunit beta-3 isoform 1 precursor (3e-68) |
| Best NR hit (blastp) | Gaba-gated chloride channel [Heliothis virescens] (0.0) |
| Best NR hit (blastx) | GABA receptor [Chilo suppressalis] (0.0) |
| GeneOntology terms | GO:0001505 regulation of neurotransmitter levels GO:0006836 neurotransmitter transport GO:0007214 gamma-aminobutyric acid signaling pathway GO:0008503 benzodiazepine receptor activity GO:0030285 integral to synaptic vesicle membrane |
| InterPro families | IPR006201 Neurotransmitter-gated ion-channel IPR006028 Gamma-aminobutyric acid A receptor IPR002289 Gamma-aminobutyric-acid A receptor, beta subunit IPR006029 Neurotransmitter-gated ion-channel transmembrane domain IPR006202 Neurotransmitter-gated ion-channel ligand-binding IPR018000 Neurotransmitter-gated ion-channel, conserved site |
| Orthology group | MCL15933 |
Nucleotide sequence:
ATGTTTGGTGATGTCAACATTTCAGCAATTTTGGATTCTCTAAGCGTAAGCTATGACAAG
AGAGTACGACCAAACTATGGAGGACCGCCTGTGGATGTGGGAGTCACGATGTACGTGCTG
TCAATCAGCTCCTTATCTGAAGTTAAAATGGATTTTACCTTGGATTTCTACTTTAGACAA
TTTTGGACAGATCCAAGACTTGCTTATAAAAAGCGGCCTGGTGTCGAGACTCTATCGGTT
GGATCTGAATTTATTCGAAATATATGGGTACCTGATACGTTCTTTGTAAATGAAAAGCAA
TCGTACTTTCACATAGCCACCACTAGCAATGAATTTATTCGTATTCATCACTCTGGATCT
ATCACACGGAGCATAAGGTTGACAATAACGGCTTCTTGTCCTATGGATTTGCAATACTTC
CCTATGGATCGGCAGCTCTGTAATATTGAGATTGAAAGCTTCGGCTACACGATGCGGGAC
ATCCGATATAAGTGGAATGAAGGCCCCAATTCTGTTGGTGTGTCGAGCGAAGTGTCGCTA
CCGCAGTTCAAGGTGCTTGGCCATCGTCAACGAGCTATGGAAATATCACTTACAACAGGA
AATTATTCGCGTTTGGCTTGTGAAATTCAGTTTGTGCGTTCGATGGGTTACTACTTAATC
CAAATTTATATTCCCTCTGGATTGATTGTTATCATATCATGGGTGTCTTTTTGGCTGAAC
CGGAATGCAACTCCAGCTAGAGTATCTCTTGGTGTCACTACTGTGTTGACTATGACTACT
CTTATGTCTTCAACGAATGCTGCGCTACCAAAAATCTCATACGTCAAATCTATAGATGTA
TATTTGGGCACCTGTTTCGTGATGGTCTTCGCCAGTTTACTAGAGTATGCAACCGTCGGC
TACATGGCGAAAAGAATTCAAATGAGGAAACAACGATTTACTGCTGTTCAAAAGATGGCT
GCTGAGAAAAAAATGCAGATTGATGGGGCTCCTGGACCTTCCGAAATACCTCGACAAGAG
CCTCTGCCACCACCAAGGACGAGCACTCTAGGCAGACCCGCTCCACCAAGCCGTTCTTCG
GAAGTGCGATTCAAGATTCATGACGGAAAATACTCTAGGAGTAGCACTTTGGATAGTGCT
CTCAATGGCGGTCGAGGGGGACCGTCATCAGCTCCAATTCCTGTCCCCGTTCCGGTTCCG
GTTGCAGTACCAGGTCCTGAGGAAGAAGCAGTGGCTCCACATCTGATTCAGGCATCAAAG
AGCATCAATAAACTACTCGGCGCTACTCCATCGGACATCGACAAGTATTCACGCATTGTT
TTCCCCGTTTGCTTCGTCTGCTTTAACTTGATGTACTGGATTATCTACCTTCATGTATCT
GATGTGGTTGCTGATGATCTTGTATTACTTGGAGAAGAAAACTAA
Protein sequence:
MFGDVNISAILDSLSVSYDKRVRPNYGGPPVDVGVTMYVLSISSLSEVKMDFTLDFYFRQ
FWTDPRLAYKKRPGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGS
ITRSIRLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSL
PQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLN
RNATPARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVG
YMAKRIQMRKQRFTAVQKMAAEKKMQIDGAPGPSEIPRQEPLPPPRTSTLGRPAPPSRSS
EVRFKIHDGKYSRSSTLDSALNGGRGGPSSAPIPVPVPVPVAVPGPEEEAVAPHLIQASK
SINKLLGATPSDIDKYSRIVFPVCFVCFNLMYWIIYLHVSDVVADDLVLLGEEN