New model in OGS2.0 | DPOGS207189  |
---|---|
Genomic Position | scaffold7:- 89929-101021 |
See gene structure | |
CDS Length | 2220 |
Paired RNAseq reads   | 7 |
Single RNAseq reads   | 16 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000645 (0.0) |
Best Drosophila hit   | glutamate receptor I (2e-125) |
Best Human hit | glutamate receptor 2 isoform 2 precursor (7e-99) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP006027-PA [Tribolium castaneum] (2e-172) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP006027-PA [Tribolium castaneum] (6e-164) |
GeneOntology terms    | GO:0004971 alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity GO:0005886 plasma membrane GO:0016021 integral to membrane GO:0005234 extracellular-glutamate-gated ion channel activity GO:0016020 membrane |
InterPro families    | IPR001320 Ionotropic glutamate receptor IPR019594 Glutamate receptor, L-glutamate/glycine-binding IPR001508 NMDA receptor IPR001828 Extracellular ligand-binding receptor |
Orthology group | MCL10030 |
Nucleotide sequence:
ATGGCGACTTTTCGTATAACGAATGTAAAGCGCGTGTCCAATGCTATAGAGGTTGTCACT
TTTCTTGGCTCACTGGAAAGACTAGATCGATGGAGCAATAAATACGTAGTATTGGACTGT
GGCACCAAACTAGCAAAGGACACACTAATCCTGCATGTTCGCGATGTTCAACTAGGAAGA
CGAAACTATCACTACTTTCTCACCGGCTTGGTTCTGGATGATCGTTGGGAAAAAGAGGTT
TCTGAATACGGTGCTATTAACATAACAGGTTTCCGACTTCTAGATTTTTCAAGGAAAGTC
GTTCAAAACTTCATTGAAGTGTGGCGAAGGGACTCTATATCGGCACAGGCAGCCCTTATG
TACGATGCTGCACAGGTTCTCGTTGATTCCATACTTCGAATGCTTAGAAAGAAACCAGAC
TTTCTTCGATCAAACATGAGGCGCAACAACTTTGCAAATAACTCCAAAGCTATTGACTGC
AACCCAACCAATAAAATTTCTCCTTATGAATATGGCGAGAGGATTTCCAAAATTATCAAA
CGGACGGAGCTTGATGGTCTGACTGGTCTCATACGATTCACTGAGACAGGTCACCGGCGA
AACTTTACCCTTCAACTTATTGAGATGACTGTTAATCGGGAAATGATTAAGATTGGAACG
TGGTATGATGATAGAGGTCTGATACCAGTAAAAACCAAATTGCCAGGTTTAAAAGAGTTG
GGATTTTACGATCGAAACAAAGTCTACATAATGTCCACTATCGCTGAAGATCCGTACGTA
ATCATAAACAACGAATACACAGATCAGTCTTCGAAATTTACTGGATTTTGCGTTGATTTG
GCGTACTTGGTGTTAGAGAAATTAGAGATCAAATTTGAGATACGTCTTGTTAAGGATAGA
AAGTATGGAGCTATCAACACAAAACTTCCTTCTGGATGGGACGGTCTCGTTGGAGAACTT
GTGCGCAAGGAAGCAGATTTAGCTATCGCACCGTTGACTGTTACATTGGAACGCGAAGGG
GTAATTGATTTCAGCAAGCCATTTTTATCGTTTGATGTCAAGTCTAAGAGTAATACACCT
TTCAGTACAACTTTTAGTTTTTTTCAACCGCTCTCAAAAGAGATATGGCTCTGCATCATA
GGAAGTTTTTTTGGTGTTAGCTTTTGCCTGTTTCTTGTTTCAAGATTTTCTCCTAACGAA
TGGCGTGTAATGTCTTTTACGGATTCTCATACAACCGAAAATAACGAGGTTGCAACAACT
AAGACAACGGTTGTAAATGAATTTAATTTATGGAATTCTATGTGGTTCTCTCTCGGTTCT
TTTATGCAACAAGGCAGCGATATCGCACCGAGGTCGATTTCTGGGAGAATTGTTGGTTCT
GTATGGTGCTTCTTTGCTCTAGTTGTGGTTTCCACATACACAGCAAACATGGCTTCATAT
TTGACAATAACGCGTATTAACGAACCCCTTCATGCTTACAGTAAAGTTACGAACTGCCCC
GAGGATCAAGTACCTAAATATATTGAAGAACCTGATGATACATGGATGGGATTTTTATCA
ACTCAATCCTTTTTGGGTGAAGAAAAGAAGAAACCATGCGAAATGTTGGTGTCCGTTACA
CAATCTGGAATAAAAGATTTCGCTGTAGCTTTTCCAAAAGGATCTAAATTACGGGATGGT
GTTAATCTCGCTCTTCAAGCTTTACGAGATAGTGGCGAGCTACAAGCACTTGTACGAAAA
TGGTTCATTGACACAAAATGTGCTGTTGATCATGAGGTTCACGGCACTTCACTGAGCTTG
AATCAATTTGCTGGACTCTTTTATATCTTAGTCGCAGGATTGGGCATGGCCCTAACTATT
GCTTTATTGGAATTCATTCAACATGGACGTTCTGAAGCTGTTCGAGCAAATATTTCTTTG
AGGAAGGCGCTAAGAGACAATGCATCTCGTAATGCACGTTTGAACCAAGAAACACCACCA
CGTGAACAACGAGAAGAAACGGATCAAATGGATTGGAATGGTGGAGGCTTTGCTGGAGCC
GTTTATCACTTTTCACTAGCTTATGGTGTAACAGAGATAGTATCAGAATACATCAGAGTC
ACTGATGTTGATGACTGCTATTCCTCTTTGCTGAACCGTCCTCTGATTGAACACCCAGAC
TTTTACCAGTTGTCCCTCAAATCACCTTTCGACTGTTCTCCTCCTGTCCTGTCTTTTTAG
Protein sequence:
MATFRITNVKRVSNAIEVVTFLGSLERLDRWSNKYVVLDCGTKLAKDTLILHVRDVQLGR
RNYHYFLTGLVLDDRWEKEVSEYGAINITGFRLLDFSRKVVQNFIEVWRRDSISAQAALM
YDAAQVLVDSILRMLRKKPDFLRSNMRRNNFANNSKAIDCNPTNKISPYEYGERISKIIK
RTELDGLTGLIRFTETGHRRNFTLQLIEMTVNREMIKIGTWYDDRGLIPVKTKLPGLKEL
GFYDRNKVYIMSTIAEDPYVIINNEYTDQSSKFTGFCVDLAYLVLEKLEIKFEIRLVKDR
KYGAINTKLPSGWDGLVGELVRKEADLAIAPLTVTLEREGVIDFSKPFLSFDVKSKSNTP
FSTTFSFFQPLSKEIWLCIIGSFFGVSFCLFLVSRFSPNEWRVMSFTDSHTTENNEVATT
KTTVVNEFNLWNSMWFSLGSFMQQGSDIAPRSISGRIVGSVWCFFALVVVSTYTANMASY
LTITRINEPLHAYSKVTNCPEDQVPKYIEEPDDTWMGFLSTQSFLGEEKKKPCEMLVSVT
QSGIKDFAVAFPKGSKLRDGVNLALQALRDSGELQALVRKWFIDTKCAVDHEVHGTSLSL
NQFAGLFYILVAGLGMALTIALLEFIQHGRSEAVRANISLRKALRDNASRNARLNQETPP
REQREETDQMDWNGGGFAGAVYHFSLAYGVTEIVSEYIRVTDVDDCYSSLLNRPLIEHPD
FYQLSLKSPFDCSPPVLSF