| New model in OGS2.0 | DPOGS206795 |
|---|---|
| Genomic Position | scaffold7:+ 856316-857329 |
| See gene structure | |
| CDS Length | 453 |
| Paired RNAseq reads | 205 |
| Single RNAseq reads | 650 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000589 (6e-15) |
| Best Drosophila hit | syntaxin 6, isoform E (4e-24) |
| Best Human hit | syntaxin-6 (3e-16) |
| Best NR hit (blastp) | syntaxin-like protein [Bombyx mori] (2e-36) |
| Best NR hit (blastx) | syntaxin-like protein [Bombyx mori] (8e-33) |
| GeneOntology terms | GO:0005484 SNAP receptor activity GO:0005886 plasma membrane GO:0007269 neurotransmitter secretion GO:0016192 vesicle-mediated transport GO:0016081 synaptic vesicle docking involved in exocytosis GO:0016020 membrane GO:0048193 Golgi vesicle transport GO:0005515 protein binding |
| InterPro families | IPR000727 Target SNARE coiled-coil domain |
| Orthology group | MCL11334 |
Nucleotide sequence:
ATGGATGGTACAAGGGAACCGCTTCTGGCTGAAGAGAGCCCCAGCCGGGGGAACAGTGGA
GGAGCTGGTGGGGCGGCCTGGGGTTCACGGCTGCCTGGTTACCCCCACTACCGCCGCCTA
CCATCCGCCAGCCCGACGCGCTACCTTGAGGATGACGTCATGTCAGCCCAGGACAAGATG
CTGATGTCGCAAGACGACCAGCTACATCTAATAAGCAATTCGGTCGGTTCATTGAAAACA
GTCTCCAAGCAAATCGGCATCGAATTGGATGAACAGGCCGTTATGCTAGATGATTTGAAC
ACTGAACTGGAAAACGCAGACTCAAAGTTGGATTCAACCCTGAAGAAGGTCGCCAGGGTG
TTGCACATGAACAATGACCGACGACAATGGACGGCAATCGGGGTTCTACTGGCATTGTTG
GTCGTCATTCTAATACTATTCATTATTCTTTAA
Protein sequence:
MDGTREPLLAEESPSRGNSGGAGGAAWGSRLPGYPHYRRLPSASPTRYLEDDVMSAQDKM
LMSQDDQLHLISNSVGSLKTVSKQIGIELDEQAVMLDDLNTELENADSKLDSTLKKVARV
LHMNNDRRQWTAIGVLLALLVVILILFIIL