| New model in OGS2.0 | DPOGS210622 |
|---|---|
| Genomic Position | scaffold1250:+ 10618-14566 |
| See gene structure | |
| CDS Length | 1038 |
| Paired RNAseq reads | 1 |
| Single RNAseq reads | 40 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013481 (2e-64) |
| Best Drosophila hit | ND |
| Best Human hit | mutS protein homolog 5 isoform c (1e-18) |
| Best NR hit (blastp) | predicted protein [Nematostella vectensis] (6e-34) |
| Best NR hit (blastx) | predicted protein [Nematostella vectensis] (2e-32) |
| GeneOntology terms | GO:0007131 reciprocal meiotic recombination GO:0000166 nucleotide binding GO:0003677 DNA binding GO:0007136 meiotic prophase II GO:0006298 mismatch repair GO:0030983 mismatched DNA binding GO:0007126 meiosis GO:0005524 ATP binding |
| InterPro families | IPR007696 DNA mismatch repair protein MutS, core |
| Orthology group | MCL24217 |
Nucleotide sequence:
ATGACTGTGGAGAAAAGTAATGTTACAGAGTTCACAAGTGGACGTACGGAAGAAAGATAT
GTGATTGGAAAATGCCACAGAAACACTGAGAAAGGGGAAACAGCAGAGGGTATGCAAGAA
ACCACCGAGGAAACTGATAATGAAGAGTGTATACTAACAGTGTGCTGTCGAGCGGGCAGG
ATGGGAGCCGCGACCTATACTGTAGGGACCGGAGAGTTACACATACTGGAAGAGATAGTG
GACCGTCCGCCGGATCATCAGCTGTTCCAGGCGTTGTTCCACCAGACGGAGCCGGTCAGG
GTGGTGGTGGACGGCAAGGCTCAGGGCTCCTTCATCGCCGTCCTCAAGAAACTGGTGTTC
AGCGACGACACTGAAGCCAAGTGCAAGCTCGACATGGTTTCCGCCAAGGAATACAATTTC
GAAGCATGTAAGCGACGTATTTTCTCCCTCTCCCTCCCCCACGAGCCCGCCAACTGTTCC
GACGAAGAGAGAACTCTGTTCGTGCGGACGGTGGTAGACTTTTCCCAGACTCAGACCGTC
CACGCGCTGGGTGCCATGCTCAGACAAGACATCGTATCGATAGACGAGGACACGTACAAA
GGACTCCAGATCTTCAGTTCTCTGTCCCACCCCAGCGGCTTCAAGAGAGGAGTTCGAGGG
ACCAACAAGGAAGGACTCAGTCTGTTTCAGCTGTTTAGCAGATGTTCCTCCAAAGTTGGT
CATCGACGTATGAGAGTGTTCCTGCGACACCCAACGACGGACCTTAAAATTTTAAAGAGA
CGACAACAAGCAATCGCCTTCTTCATGAGACCGCAGAGTGACTCCCTGTTCAGGAATATA
TGCGCGTCTCTGAGATTTGTGAAAAACGTCAATGTCAACTTTCCCCAATCTCCGTTCTTC
TCGTCTAGTCTTCAAGTCATAGTCACATTCTATAGCGAAAACGATGTCGTCGACAAAAAA
GTTACACCAGGACACCTTCTGATTAACGGCTGTCATGGTATCAATTACCAACAGGAAGAG
AAGAGGGCTTTAGGCTGA
Protein sequence:
MTVEKSNVTEFTSGRTEERYVIGKCHRNTEKGETAEGMQETTEETDNEECILTVCCRAGR
MGAATYTVGTGELHILEEIVDRPPDHQLFQALFHQTEPVRVVVDGKAQGSFIAVLKKLVF
SDDTEAKCKLDMVSAKEYNFEACKRRIFSLSLPHEPANCSDEERTLFVRTVVDFSQTQTV
HALGAMLRQDIVSIDEDTYKGLQIFSSLSHPSGFKRGVRGTNKEGLSLFQLFSRCSSKVG
HRRMRVFLRHPTTDLKILKRRQQAIAFFMRPQSDSLFRNICASLRFVKNVNVNFPQSPFF
SSSLQVIVTFYSENDVVDKKVTPGHLLINGCHGINYQQEEKRALG