| New model in OGS2.0 | DPOGS203658 |
|---|---|
| Genomic Position | scaffold528:+ 16702-60776 |
| See gene structure | |
| CDS Length | 2205 |
| Paired RNAseq reads | 318 |
| Single RNAseq reads | 845 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003455 (0.0) |
| Best Drosophila hit | alpha-catenin related (4e-81) |
| Best Human hit | alpha-catulin (7e-89) |
| Best NR hit (blastp) | PREDICTED: similar to ENSANGP00000022276 [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000022276 [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR001033 Alpha-catenin IPR006077 Vinculin/alpha-catenin |
| Orthology group | MCL16410 |
Nucleotide sequence:
ATGGACGCTCTCTCCGATGACGACGAATACGTGTGCCGCGAGCCCCAGATTAGCAGCCTG
GTGGCGACTCGGGGAGAGGCAGCTGCAGGGGGCGCGGCGGTGCAGCGTGTAGGTGCCGCT
GTCTGCTGTGCTGTCGAGAGATTTGTTGCCGTTGGTGAAACTATAGCTGACGATAATCCC
GACGTTCGACACAGTATGGTGCTTGCTTGCAAAGAAGCCAGGGCTGCAGGTCGGGCGATA
GAGCGGGTGTGTACGGGAGCAGACGGTTCTGGCATGATATCGGCAGCTAGAGCCTTGCTG
GCCTCTGTTACACGGGTACTACTTTTGGCCGACATGGTTGTTGTAAGGCAACTGCTGCTG
GCTAAGGATAAGGTTGCGCGATCGTTAGATCGTTTAGAGTCTGTGTCCAACTTTGCTGAG
TTCGTTCGTGCATTCACTGAGTTTGGAGGTGGGATGGTGGAGTTAGCGAGGCTTACAGCA
GAGAGACGAGCAGACCTCAGGGATGAGAGAAGAAGAGCACAAGTAGCCGCTGCCAGAAAC
GTTCTGGAACGTTCAACACTGATGCTCCTCACATCGTCTAAGACATGTTTAAGACATCCG
GGCAGTGCGTCAGCTAGAGAAAACCGTGATACAGTTTTCTGTCAAATGCGACGCGCGATG
GACCTCATACACTACGTGGTACGGGACGGTCTCCCGGGACACGACGATCAATCCCACGAG
GCTTCACAATGGGAAGCGGGAACAGCGTTAGGAGCACTTCGTGGTCTTTCAACGCAAGTA
AGAGCTGCTAGAGCTCGGGGCGGTGCAGACGGTGGGAGAAGAAGAGCGCTGGCAGCAACC
CTTAGAGCCCTAGTTGAAAGAACGCATGACTTCACCGACTCCGCGTACACGTCGCACGAG
CATAGACAAAGAATACTAGCCCTAGCCGAGAGGATAGCCTACGAACTGGAAAGACTAGTC
GCCGTCGCTGTATCATTAGAAGAGCAAGCCGGAAGTGGTAGTGGAGCGGCATTAGAAAGT
GCGTGTACAGGAGCAACTAGTGCTGCCTCAGAACTTGAACGAGCCCTGGTGGCTGCTGCA
AGGGACCAGGCCCGAGATCTAGCTCCTCTTGCTGAAGAAGCGAGAAAACTCGCGTCAGAT
CTAGCGCACATAGGTAATCTTCAACGCAAAATAGCAAGCACCTGCGGTGAGAGAGAATCA
GAGAGACTGCACAATATAGCTAGCCAGCTGCACGAACAATTGGATCATATAATTGAGGCA
GATTGTTTACAGGTGTGTAAATTACTCAGACACATAGCGATGTCAGAAACACTTCAAGTA
AGTGCGAAATTCGCTGAAATAAACCTTAGAATATATGGACCGCAAGTGGTTACTGCAGCA
AGGACTCTGGCTGCACATCCAAATAGTGCTGCAGCCAGAGAGAATCTAGATGTGTTCGTT
GACATGTGGGCGTGGCTGTTAGCTGATGCGGCTCGTCTCGCTAAAGAACTGCTTGATCTA
ACAGATGAGAGGCCAGACAAACAACAATATAGCAGCCTACCTAGACCTGGAAAACATGGA
ACAACAAGTAAACCGTTGAAAGCAGTGAAATTGGATTCCGATGAGCAGGCGAAAATAGCT
AAATCGGGTTTAGAAATGAAAATGATGTCTTCGGAAATGGATGCAGAGACTGAAAAATGG
CAAGGAGCCGATGAAAACAACGACATTGTGAAGAGGGCGAAAAATATGTCTTCCATGGCC
TTCGCTATGTACCAATTCACAAAAGGTGAAGGTCGACTTAACACTACACAAGACCTCTTC
ACACAAGCCGAATACTTCGCAGAAGAAGCGAATAGATTATATAAAATCGTTCGGCAATTT
TCCTATCAGGTACCTGCCGGAACAATAAAGAAAGAGTTACTTGAACATTTAGATAAAGTT
CCAACGTACGTACAACAGCTTCAGTTCACCGTGAAGGAGCCAACTGTAGGCCGAGCGGCG
ACCTTTAGCAAAGTAGATAACGTCATTCAAGAAACTAAACATTTAATGAATGTCATCAGC
AAAGTCGTCACTACTTGCTTCGACTGCGCAAACAAGTACAAATTGGACTTCACGGGTCTG
TCGGCTGCGGGAGCAGGAAGAGGTAGCTCCAGGGACGAGGAGGCAGCGGGCGGCGGAGGG
GGAGACGCGAAGCCCGGGGGGAGCTCATCAGAGTCGGCCATGTGA
Protein sequence:
MDALSDDDEYVCREPQISSLVATRGEAAAGGAAVQRVGAAVCCAVERFVAVGETIADDNP
DVRHSMVLACKEARAAGRAIERVCTGADGSGMISAARALLASVTRVLLLADMVVVRQLLL
AKDKVARSLDRLESVSNFAEFVRAFTEFGGGMVELARLTAERRADLRDERRRAQVAAARN
VLERSTLMLLTSSKTCLRHPGSASARENRDTVFCQMRRAMDLIHYVVRDGLPGHDDQSHE
ASQWEAGTALGALRGLSTQVRAARARGGADGGRRRALAATLRALVERTHDFTDSAYTSHE
HRQRILALAERIAYELERLVAVAVSLEEQAGSGSGAALESACTGATSAASELERALVAAA
RDQARDLAPLAEEARKLASDLAHIGNLQRKIASTCGERESERLHNIASQLHEQLDHIIEA
DCLQVCKLLRHIAMSETLQVSAKFAEINLRIYGPQVVTAARTLAAHPNSAAARENLDVFV
DMWAWLLADAARLAKELLDLTDERPDKQQYSSLPRPGKHGTTSKPLKAVKLDSDEQAKIA
KSGLEMKMMSSEMDAETEKWQGADENNDIVKRAKNMSSMAFAMYQFTKGEGRLNTTQDLF
TQAEYFAEEANRLYKIVRQFSYQVPAGTIKKELLEHLDKVPTYVQQLQFTVKEPTVGRAA
TFSKVDNVIQETKHLMNVISKVVTTCFDCANKYKLDFTGLSAAGAGRGSSRDEEAAGGGG
GDAKPGGSSSESAM