| New model in OGS2.0 | DPOGS209401 |
|---|---|
| Genomic Position | scaffold1630:+ 4186-11541 |
| See gene structure | |
| CDS Length | 1641 |
| Paired RNAseq reads | 667 |
| Single RNAseq reads | 3281 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007107 (9e-112) |
| Best Drosophila hit | spaghetti (2e-21) |
| Best Human hit | RNA polymerase II-associated protein 3 isoform 3 (4e-24) |
| Best NR hit (blastp) | TPR-repeat protein [Bombyx mori] (1e-110) |
| Best NR hit (blastx) | TPR-repeat protein [Bombyx mori] (4e-93) |
| GeneOntology terms | GO:0005488 binding GO:0008150 biological_process GO:0005575 cellular_component |
| InterPro families | IPR019734 Tetratricopeptide repeat IPR001440 Tetratricopeptide TPR-1 IPR013026 Tetratricopeptide repeat-containing IPR011990 Tetratricopeptide-like helical |
| Orthology group | MCL13410 |
Nucleotide sequence:
ATGGACAAAGCTTTTGAGATTCAGAAAAAAGCTCGGGATAATGTGAAGACATTGCATACA
TATCTTACCGATTTACAGAACTGGGAAATTGAAATGAAACGTAAAGAGGCCGCTCTTAAC
GGTGACTTAGAGCAGGAACTCCCACCAGTGAGGAGTAAGGTGAAGAGAGAAAGACCTGTT
CAGGTAAAGCAGAAACCAGAGAAAAAAATAGTTGCTTCAGACTATCAAGCATGGGAAAAA
TTTGATGCAGAGAAAGCATGCGAAGAGGTTGATATGGCTGATATAGGGCCGGTGTCACTT
GACAGTAAGAAGAGCAACAAAATTAAGACTGAGAAGCTGAAGGAGGAAGCGCAGTATGAG
AAGGAGAGGGGCAATAGTTTTGTTAAACAAGAAAAGTGGGATGAGGCGATAGCATGCTAC
AACAGGGCCATTGAGTTAGTTCAAGATGATGCTATTTACTACGCCAATAGAGGATTGTGT
TATCTTAAAAAAGATAGCTGGCGCTGCGAGGCGCGAGACGAGACGAGAGCGACCATTTAC
ACTCTCACCTTGTGCTTCGTCTCGGGCCTCGTCTCGCGAGTTTTACACCAAGCGGAATCC
GACTGCACAGAGGCCATACGGTTAGATCCTACGTACGTGAAGGCATTTCAACGTAGAGCG
TCTGCTAGAGAGAAGCTCGGCTCTCTAAGGGCAGCTTCACACGACCTGAGCGAAGTCATT
AGATTGGAACCACACAACATGCTGGCCAGACAACAGTTAGAATGCATCAAAAACAGAATG
GGAACTAAGGGGTCGAAATCAAAGTCATCTCCCACAACACCGCCCGGCGAAACGAAAACA
GCTCCGGAAAAAAAAAGCAAAATAGTTGAACTGCCCGATAGTAAAACTGAATTGAGTCCT
TTAGAGAAATGGAGAGACGGAGTCCACGAGAACATTACAGTCATAAAGCCAGTCAAGAAG
CCACCTCATCTGAGGTCTAAGCGAGCATTGAAACACATCACAATACAGGAGATACCCCTC
GGTAGAGCCATCGATAAGTCCAACGACACGAACAACAACAAATCTACAAATGTGACTCTG
GCAGCGGATATCCAGGAGAAAATGGTGTTCAATGTGAACGAGAAGCACAAGGAGAGTATG
GTGGTGCCCACGAACAGTGTGCAGTTCATGTCAGAGTGGAAATACTTGAAGGGTAACGAT
AGAGCCAGGGGGGATTACTTGAGTTCACAGCCTCGCCTTGCCAATGAGAAAATGCCTAGG
ACTTATTCCACGAACCTGTCTTCATTTGGATTGGTGGTTTCTTCAGATTCCCCTTTATCA
CCACACGAGGCTGCCTTTGTACTTCCTCCCGTTTTCGATATAATACCCCCGGACCTCCTG
CCATCCATCTTTGAGAACGCCCTCGAGAGTGATGTGTTGTCTACAGTACTGAGAACCATC
CACAACAACGTGGACCGCTTCCCCCACTCAGTGGCCGCTTACCTCAAGAATATATGTCGC
GTGAAGCGCTTCTCAGCTTTAGCTATGTTCCTTAGCGCTATAGATAAAGAATTAATTAAC
AATATGCTCAAGCACTGCAGGGACGTGGAAAATCTCAGTGAGAGTGAAATAACTGATTTG
ATGAACAAATATGAACTCTAA
Protein sequence:
MDKAFEIQKKARDNVKTLHTYLTDLQNWEIEMKRKEAALNGDLEQELPPVRSKVKRERPV
QVKQKPEKKIVASDYQAWEKFDAEKACEEVDMADIGPVSLDSKKSNKIKTEKLKEEAQYE
KERGNSFVKQEKWDEAIACYNRAIELVQDDAIYYANRGLCYLKKDSWRCEARDETRATIY
TLTLCFVSGLVSRVLHQAESDCTEAIRLDPTYVKAFQRRASAREKLGSLRAASHDLSEVI
RLEPHNMLARQQLECIKNRMGTKGSKSKSSPTTPPGETKTAPEKKSKIVELPDSKTELSP
LEKWRDGVHENITVIKPVKKPPHLRSKRALKHITIQEIPLGRAIDKSNDTNNNKSTNVTL
AADIQEKMVFNVNEKHKESMVVPTNSVQFMSEWKYLKGNDRARGDYLSSQPRLANEKMPR
TYSTNLSSFGLVVSSDSPLSPHEAAFVLPPVFDIIPPDLLPSIFENALESDVLSTVLRTI
HNNVDRFPHSVAAYLKNICRVKRFSALAMFLSAIDKELINNMLKHCRDVENLSESEITDL
MNKYEL