| New model in OGS2.0 | DPOGS200123 |
|---|---|
| Genomic Position | scaffold623:- 453-4141 |
| See gene structure | |
| CDS Length | 729 |
| Paired RNAseq reads | 113 |
| Single RNAseq reads | 391 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002401 (7e-87) |
| Best Drosophila hit | quemao, isoform B (1e-79) |
| Best Human hit | geranylgeranyl pyrophosphate synthase (1e-62) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP006894-PA, partial [Acyrthosiphon pisum] (2e-85) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP006894-PA, partial [Acyrthosiphon pisum] (3e-82) |
| GeneOntology terms | GO:0004337 geranyltranstransferase activity GO:0004161 dimethylallyltranstransferase activity GO:0004311 farnesyltranstransferase activity GO:0008299 isoprenoid biosynthetic process GO:0008354 germ cell migration GO:0035050 embryonic heart tube development |
| InterPro families | IPR008949 Terpenoid synthase IPR017446 Polyprenyl synthetase-related IPR000092 Polyprenyl synthetase |
| Orthology group | MCL10887 |
Nucleotide sequence:
ATGCCTTTTACATACATCCAACAAGTACCTGGGAAGCAAGTTCGGGCTAAACTTACACTC
GCCATCAATTACTGGTTGAAAGTCAGTGATAACAAACTCAAAGCCATTGGAGAAATTGTG
CAAATGTTACACAACTCAAGCTTACTTTTGGATGATATACAAGATAATTCTATACTCCGT
CGCGGGATACCAGTCGCGCATTCCATATATGGCATCGCTAGTACTATCAACGCTGCCAAT
TATGTGGTCACCATTGCTTTGGGAAAGACATTGCAGCTTGATCATCCTCTGGCAACAACA
GTGTACACAGAACAGCTTCTTGAGCTGTATCGAGGACAAGGTATTGAGATATACTGGAGA
GATAACTTCTATTGTCCCACTGAAGACGAATATAAGGAGATGACCATAAAAAAAACCGGT
GGTCTCTTTATGTTGGCGATACGTCTCATGCAGTTGTTCAGTGAGAACAAATCAGATTTC
ACCAAACTGTCATCCATATTGGGACTGTATTTCCAGATCCGTGACGACTACTGTAATCTG
TGTTTACAGGAGGTAATTATACATATACTAGTTTTTGCTCGCGACTGCGTCCGTGTGAAC
GTTAGAGCTGTGCACATAGAGAAATGTATGGCTGTGTTACGACAAATACATATAAGCCTA
AGCTGCAGCGTTTTCATTTTAAATAATCTAAACACCGACTGCAGAGCCATCTGGCGGGCT
GATTTGTAA
Protein sequence:
MPFTYIQQVPGKQVRAKLTLAINYWLKVSDNKLKAIGEIVQMLHNSSLLLDDIQDNSILR
RGIPVAHSIYGIASTINAANYVVTIALGKTLQLDHPLATTVYTEQLLELYRGQGIEIYWR
DNFYCPTEDEYKEMTIKKTGGLFMLAIRLMQLFSENKSDFTKLSSILGLYFQIRDDYCNL
CLQEVIIHILVFARDCVRVNVRAVHIEKCMAVLRQIHISLSCSVFILNNLNTDCRAIWRA
DL