| Genomic Position | scaffold1068:+ 29850-31772 |
|---|---|
| See gene structure | |
| CDS Length | 780 |
| Paired RNAseq reads | 1 |
| Single RNAseq reads | 15 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002632 (5e-07) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (2e-95) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (6e-92) |
| GeneOntology terms | GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10020 |
Nucleotide sequence:
ATGTTTGATTTTTTTGTGAACACTGGTAGACTGAATGATATCAACAGAATTTTAAGTAAA
ATGTTTATGGAGCAGACATCTCAGCCTGATTCCGTGTGTGAGAGTCACATTAACACGCTA
CTTCTCGCTCTTGGGCAGCTTAAAAATGGAAAAGCCCCTGGAGAGGATGGCATAACAACA
GAATTGTTGAAATCCGGAGGTAAACCCGTACTGAAGGGGCTCCAAAAGCTGTTCAATTCT
GTCCTCTTCGAAGGAAGAACTCCGGAGGCGTGGAGTAGAGGTGTGATCGTCCTGTTTTTC
AAAAAGGGAGACAAATCCCTGCTGAAGAACTATCGACCCATTTCCCTGCTAAGGCACATC
TATAAGCTGTTTTCAAAAGTGATCACAAACCGTCTTGCGCGAAGACTCGACGAATTCCAA
CCACCGGAACAGGCTGGGTTTCGGAGCGGATACGGCACCATAGACCACATTCACACGGTG
CGGCAGATTATACAGAAGACCGAAGAGTATAATCAGCCCCTTTGTCTAGCATTCGTGGAC
TATGAGAAAGCTTTTGACTCGATTGAAACTTGGTCTGTTCTGGAGTCCCTGCAACGTTGC
CAAGTTGATTGGCGGTATATCCAAGTGATAAGATGTCTCTACGAAGCCGCCACCATGTCC
GTCCAAGTACAGAATCAGCAAACAAGTCCCATACCGTTGCATCGAGGAGTGAGACAGGGG
GAACCGATTGCAGTCCACGTGCAAATATGTCTATCTGGGGCAAGTATTGCAGTTGGGTAG
Protein sequence:
MFDFFVNTGRLNDINRILSKMFMEQTSQPDSVCESHINTLLLALGQLKNGKAPGEDGITT
ELLKSGGKPVLKGLQKLFNSVLFEGRTPEAWSRGVIVLFFKKGDKSLLKNYRPISLLRHI
YKLFSKVITNRLARRLDEFQPPEQAGFRSGYGTIDHIHTVRQIIQKTEEYNQPLCLAFVD
YEKAFDSIETWSVLESLQRCQVDWRYIQVIRCLYEAATMSVQVQNQQTSPIPLHRGVRQG
EPIAVHVQICLSGASIAVG