| New model in OGS2.0 | DPOGS210703 |
|---|---|
| Genomic Position | scaffold9802:+ 5-2968 |
| See gene structure | |
| CDS Length | 444 |
| Paired RNAseq reads | 86 |
| Single RNAseq reads | 835 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006314 (4e-27) |
| Best Drosophila hit | twin, isoform C (2e-41) |
| Best Human hit | CCR4-NOT transcription complex subunit 6 (1e-37) |
| Best NR hit (blastp) | PREDICTED: similar to CG31137-PC, isoform C, partial [Apis mellifera] (1e-44) |
| Best NR hit (blastx) | PREDICTED: similar to CG31137-PC, isoform C, partial [Apis mellifera] (1e-45) |
| GeneOntology terms | GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:0030014 CCR4-NOT complex GO:0030528 transcription regulator activity GO:0005737 cytoplasm GO:0005515 protein binding GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening GO:0048477 oogenesis |
| InterPro families | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
| Orthology group | MCL18459 |
Nucleotide sequence:
CAGATAACAGGAGGTGTGCGCGCGCTGGCGCCGCAACTGTTCCAACTGACGCACCTGACG
GCGCTGTATCTGAACGACAATTCCCTGCAGCGCATACCTCCGGACATAAACCAGCTGGTG
AACCTTCACACGCTGGACATGTCAAACAACAAGCTGAGAGCTCTGCCCGCGGAGTTAGGA
GACCTCATACAGCTCAGAGAGCTACACCTTCACAATAATTATTTAAGAGTACTGCCTTAT
GATCTCGGGAAACTGTTCCATCTCCAAATGCTCGGTCTACAAGGGAATCCGCTCAGTAAA
GAGATGCTCTCCATTTACAATGACAGCAACGGTACTGCCAAGCTGTTGACCTATCTACTT
GATAATATGCAAGGTAAGTTATACTTTATTACAATACAATCATATATATCACTATATACG
TACATATTAATTGCAATATTGTAG
Protein sequence:
QITGGVRALAPQLFQLTHLTALYLNDNSLQRIPPDINQLVNLHTLDMSNNKLRALPAELG
DLIQLRELHLHNNYLRVLPYDLGKLFHLQMLGLQGNPLSKEMLSIYNDSNGTAKLLTYLL
DNMQGKLYFITIQSYISLYTYILIAIL