| New model in OGS2.0 | DPOGS204019 |
|---|---|
| Genomic Position | scaffold3506:- 8955-10403 |
| See gene structure | |
| CDS Length | 1449 |
| Paired RNAseq reads | 2038 |
| Single RNAseq reads | 4907 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004794 (0.0) |
| Best Drosophila hit | Na/Ca-exchange protein, isoform C (2e-148) |
| Best Human hit | sodium/calcium exchanger 3 isoform A precursor (3e-128) |
| Best NR hit (blastp) | AGAP002859-PA [Anopheles gambiae str. PEST] (0.0) |
| Best NR hit (blastx) | AGAP002859-PA [Anopheles gambiae str. PEST] (0.0) |
| GeneOntology terms | GO:0005432 calcium:sodium antiporter activity GO:0005886 plasma membrane GO:0016021 integral to membrane GO:0006816 calcium ion transport GO:0055085 transmembrane transport GO:0007154 cell communication GO:0007602 phototransduction |
| InterPro families | IPR004836 Sodium/calcium exchanger protein IPR003644 Na-Ca exchanger/integrin-beta4 IPR004837 Sodium/calcium exchanger membrane region |
| Orthology group | MCL10757 |
Nucleotide sequence:
ATGTACCTCTTCATTGGTGTATCCATCGTTTCCGACAGATTTATGGCAGCCATTGAGGTT
ATTACATCTAGAGAAAAAGAGGTGCGCGTGCGACGAAATGGCGCTGAGCAAATTGTTGTC
GTTCGAGTTTGGAATGAGACGGTTGCGAATTTAACATTAATGGCTTTAGGATCAAGTGCG
CCTGAAATATTACTCTCAGTCATAGAAATTGCTGGAAAAAATTTCGAAGCTGGAGATCTC
GGACCGGGTACCATTGTAGGATCAGCTGCTTACAATTTGTTTGTGATTATAGCCATTTGT
GTCATGGTGATTCCAGATGGGGAAGTACGAAAAATAAAGCATTTGAGAGTCTTTCTTGTC
ACAGCTACTTGGTCAATATTTGCGTATGTGTGGCTTTATCTTATTTTAGCAGTAATATCA
CCTAGTGAAGTGGAAGTTTGGGAAGGAGCTGTTACATTTCTATTTTTTCCTGCCACAGTT
ATGACCGCATATATAGCAGATCGAAGGCTTTTGGTCTACAAATATCTTAAAAAAGGTTAT
CGTGTTAATGAAAGAGGTGTTATTGTCGAGGTAGAAGGTGATGGCTCCGTTGAAATGGCT
TTAAAACCAAACGATGATGGAACCGAAGATGACGAATTGGAAAAATCACGAAGAGAATAT
ATACAGGTCTTACGTGAGTTAAGGAGACAAAATCCCGAGGAAGACCTAGAAACTGTTGAG
AGAATGGCTTTAGAGACTTTGATGGCACGTGGACCGAAATCTCGCGCTTTTTATCGAGTA
TCAGCAACACGCATGATGACAGGTGGCGGAGACTTTTCCCGAAAAATATCTGAAAGAGCG
CAAAGTGACTTAAGCGAAGTTAAAGCAGAATTACAACGGCGAGAATCAACATCTACTGGA
TCTGAGATTAAAGGACCAAATGTTCGTTTTGATCCTGATCATTATACTGTAATGGAAAAT
TGCGGTTCATTTGAAGTGAGAGTGGTGAGAAGAGGCGATTTAAATGGAGAGGTCACTGTA
CAATACTGTACCGAGGATGGGACTGCTGAGGCCGGATCCGATTATATAGCAACACAGGGG
TGTCTCGTTTTCGGTCCTGGTGAGGCAGAGAAAAAATTTAGCGTGCAAGTAATCGATGAC
GATGTATTTGAAGAAGACGAACATTTTACTGTTCGTTTAAGTTCTGCTAAAGGCGCTTGT
TTGGCCTCACCATCTACCGCCACCGTTGTTATATTAGATGACGATCATTCCGGTGTGTTC
TCATTCCCCCAAAGGGATTTCGAGTTGACGGAATCTGTAGGAACATATGAATTGAAAGTA
GCAAGGACGGCAGGTGCTCGAGGCAAGGTACGAATACCATATTGGACCGAAGATGGAACA
GCGAAGAGTGGTGCACAATTTGAAGCAGTGCAAGATCACATTGTCTTCGAGAACAACGAA
ACTGAGTAA
Protein sequence:
MYLFIGVSIVSDRFMAAIEVITSREKEVRVRRNGAEQIVVVRVWNETVANLTLMALGSSA
PEILLSVIEIAGKNFEAGDLGPGTIVGSAAYNLFVIIAICVMVIPDGEVRKIKHLRVFLV
TATWSIFAYVWLYLILAVISPSEVEVWEGAVTFLFFPATVMTAYIADRRLLVYKYLKKGY
RVNERGVIVEVEGDGSVEMALKPNDDGTEDDELEKSRREYIQVLRELRRQNPEEDLETVE
RMALETLMARGPKSRAFYRVSATRMMTGGGDFSRKISERAQSDLSEVKAELQRRESTSTG
SEIKGPNVRFDPDHYTVMENCGSFEVRVVRRGDLNGEVTVQYCTEDGTAEAGSDYIATQG
CLVFGPGEAEKKFSVQVIDDDVFEEDEHFTVRLSSAKGACLASPSTATVVILDDDHSGVF
SFPQRDFELTESVGTYELKVARTAGARGKVRIPYWTEDGTAKSGAQFEAVQDHIVFENNE
TE