| New model in OGS2.0 | DPOGS206803 |
|---|---|
| Genomic Position | scaffold1:- 3785813-3788977 |
| See gene structure | |
| CDS Length | 600 |
| Paired RNAseq reads | 435 |
| Single RNAseq reads | 1575 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000627 (2e-83) |
| Best Drosophila hit | ubiquitin conjugating enzyme 4 (2e-70) |
| Best Human hit | ubiquitin-conjugating enzyme E2 K isoform 1 (5e-63) |
| Best NR hit (blastp) | ubiquitin conjugating enzyme 4 [Bombyx mori] (1e-93) |
| Best NR hit (blastx) | ubiquitin conjugating enzyme 4 [Bombyx mori] (2e-85) |
| GeneOntology terms | GO:0004842 ubiquitin-protein ligase activity GO:0043687 post-translational protein modification GO:0051246 regulation of protein metabolic process GO:0019787 small conjugating protein ligase activity |
| InterPro families | IPR016135 Ubiquitin-conjugating enzyme/RWD-like IPR009060 UBA-like IPR000608 Ubiquitin-conjugating enzyme, E2 IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote IPR023313 Ubiquitin-conjugating enzyme, active site |
| Orthology group | MCL13466 |
Nucleotide sequence:
ATGGCGAATATTGCTGCAAAACGTATAAAAAGAGAATTCAAAGAAGTCATGAAGAGTGAA
GAGGTAGCAGGTGGTGCAATTAAACTGGAACTGGTTAACGACAGTTGGACAGAGCTTCAA
GGCGAGATCGCAGGTCCATCGGACACGCCGTACGAGGGAGGGACCTTCGTCTTAGAGATC
AAAGTACCGGAGACGTATCCATTCAATCCGCCAAAGATCCGTTTCGTTACGAAGATCTGG
CATCCGAATGTGTCTTCGGTGACGGGCGCTATATGCTTGGACATCTTGAAGGATCAGTGG
GCGGCGGCGCTGACGCTGCGGACGGTACTGTTGTCTTTGCAGGCTCTGCTCTCGGCAGCG
GAACCGAACGACCCACAAGACGCTGTAGTGGCCAAGCAATACAAAGAGAACCCTCAGTTG
TTCCACATGACCGCTAGACATTGGACGAATGTGTACGCCGGCGGACCAGCCAGTATCGTG
GAGTTCAACCAGAAGGTTCAGCGTCTGTTGGACATGGGAGTAGACGAACACGACGCCCGC
GTCGCTCTCTCCACGTACGACTGGGAGCTGGAGCGCGCCACCGAGCAACTCTTCAGCTAG
Protein sequence:
MANIAAKRIKREFKEVMKSEEVAGGAIKLELVNDSWTELQGEIAGPSDTPYEGGTFVLEI
KVPETYPFNPPKIRFVTKIWHPNVSSVTGAICLDILKDQWAAALTLRTVLLSLQALLSAA
EPNDPQDAVVAKQYKENPQLFHMTARHWTNVYAGGPASIVEFNQKVQRLLDMGVDEHDAR
VALSTYDWELERATEQLFS