| New model in OGS2.0 | DPOGS206804 |
|---|---|
| Genomic Position | scaffold1:- 3758715-3782353 |
| See gene structure | |
| CDS Length | 1995 |
| Paired RNAseq reads | 1632 |
| Single RNAseq reads | 3768 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000628 (0.0) |
| Best Drosophila hit | bestrophin 2 (0.0) |
| Best Human hit | bestrophin-3 isoform 1 (1e-88) |
| Best NR hit (blastp) | PREDICTED: similar to Bestrophin 2 CG10173-PA [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Bestrophin 2 CG10173-PA [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0005254 chloride channel activity |
| InterPro families | IPR000615 Bestrophin IPR021134 Bestrophin/UPF0187 |
| Orthology group | MCL15047 |
Nucleotide sequence:
ATGACTATATCGTACGCCGGTGAAGTTCCAAATGGCAGCAGTTTTGGATGTTTCTGGCGG
ATCCTCTGCAAATGGCGTGGCAGCGTTTACAAGTTGGTGTGGCGGGAGCTGCTGGCGTAC
CTCACTCTCTACTATACCATCAACTTGCTGTATCGGTTCGCGCTCACCGAGCATCAACAA
AGAATATTCGAGAAGGTTCGACAGTACTTCGGCGCTCAGAGCGAGTCTATTCCGATGTCC
TTCGTCCTGGGTTTCTACGTAAGCCTGGTAGTGAAGCGTTGGTGGGAGCAGTACAAGTTG
CTGCCTTGGCCGGATACACTCGCGCTGTTCATCTCCGCGGGCATCCCCGGAGCGGACGAA
ACCGGGCGGCTGATGAGGCGGAATATAGTCAGATACGCCATTTTGGCATACGTGATCACC
TTGCAGCGAGTCTCACTCAGGGTCAAGAGACGGTTCCCCACGTGGCAGCACGTTGTGGAC
TCCGGTCTTATGTTGGAGAGTGAGAGAAAGGTATTCGAGAAGATGGACGGTAAGAGCCCA
ATGTCTAAATACTGGATGCCCCTGGTGTGGGCGACGAATATCATCAACAGGGCGCGGAAG
GAAGGCTTGATCACCAGCGACCACATCGTGCAAACTCTCTTGGTGGAGCTGTCTGACATC
AGGCGACGGTTGGGAGCGCTTATCGGGTACGACACTGTGTGCGTGCCTCTCGTCTATACA
CAGGTTGTGACATTAGCCTTGTACACATACTTTGTGGCAGCACTGATGGGTCGGCAGCTG
GTACCACCTGCTCCAGGTAGTACCTCCAAATACGAACCAGATGTTTACTTCCCGTTATTC
ACAGCCTTACAATTTTGTTTCTACGTAGGCTGGCTAAAGGTTGCGGAGGTTCTTATAAAC
CCATTCGGCGAAGATGACGATGACATTGAGCTTAACTGGTTAATCGACAGACACATAAAG
GCGGCATACATGATAGTGGATGAAATGCACGAGGAACATCCAGAACTTCTCAAAGACCAG
TACTGGGAGGAAGTAGTTCCAAAGGACTTGCCGTACACTGTTGCCTCAGAGCATTACCGC
CGCCACGAGCCGCCCTGCTCCGCTGACCACTACAAAGTAAAAGCAGAAGACGCTGTATAC
GCCAATGTACAAGCACCTAGAAAAAGTCATGACGAAACATATGCTGATTATGAGAGTGTA
GATACACCATTGGTAGAACGACGAAAAAACTGGTTTCAGAGACAGATATCAAGAATGGGT
TCAGTTCGATCGGCTTCGACTGATTATTCTTCTGGTGGGCTATTTGGAAGAAACCGTCAT
AATTCCATGGTGTACTCCAGTCCAGAGACGGGCCAGCCCACTGCACCGCCTCAACAACAC
CATAAGATGTCATTGTACGAGAGACTCGTGGGCAGGAAGTCAGGGAGAGGACAGCATCGA
CAGAATTCTAAACATGGCAGTCAAAAGAGTAATGGTTCAGCAATACCGATAACATTACGC
AATCGCCCACGTATTCCTACACCGGACGTGACCAAAGAAGTTATGGACCGTGAGAACCGC
ATTACAATGGGGATGCAGAATATGGGGGTAATTATGGCTCACCAGGGCTACCAAAACGAG
GTGCCTGTTTTAGGAGCTCTCGTGCTCTCTCCAATCCAAGAGCTTGACAGTGGCTCTGTC
AACAACACCTTGCATGCCGGACAGCCTGGAACTACAGCACTAGCACAAGCTGTGCTGTCT
CCTGGTCTGACTACAGGATTAACTCCAATGCTGACAGCAGCTCCTGTGGTGTCGCCGGTA
ACATTGTCCCCCATGGGGGTCTCACAACTTCTCGGTAGTTCGACACCATCGACACCTCGC
GCAGATCGCACACCGCCTGCGCCGCGTGCCACGGTCACTGAGCTTCCGTCTGATAGCGAA
CACAGCGGGTCAGGGACGCCGCCGGAATTCAATAGAAAGCCAAACGGCTCTAAACGAGGA
GAAGTTTATGTATAA
Protein sequence:
MTISYAGEVPNGSSFGCFWRILCKWRGSVYKLVWRELLAYLTLYYTINLLYRFALTEHQQ
RIFEKVRQYFGAQSESIPMSFVLGFYVSLVVKRWWEQYKLLPWPDTLALFISAGIPGADE
TGRLMRRNIVRYAILAYVITLQRVSLRVKRRFPTWQHVVDSGLMLESERKVFEKMDGKSP
MSKYWMPLVWATNIINRARKEGLITSDHIVQTLLVELSDIRRRLGALIGYDTVCVPLVYT
QVVTLALYTYFVAALMGRQLVPPAPGSTSKYEPDVYFPLFTALQFCFYVGWLKVAEVLIN
PFGEDDDDIELNWLIDRHIKAAYMIVDEMHEEHPELLKDQYWEEVVPKDLPYTVASEHYR
RHEPPCSADHYKVKAEDAVYANVQAPRKSHDETYADYESVDTPLVERRKNWFQRQISRMG
SVRSASTDYSSGGLFGRNRHNSMVYSSPETGQPTAPPQQHHKMSLYERLVGRKSGRGQHR
QNSKHGSQKSNGSAIPITLRNRPRIPTPDVTKEVMDRENRITMGMQNMGVIMAHQGYQNE
VPVLGALVLSPIQELDSGSVNNTLHAGQPGTTALAQAVLSPGLTTGLTPMLTAAPVVSPV
TLSPMGVSQLLGSSTPSTPRADRTPPAPRATVTELPSDSEHSGSGTPPEFNRKPNGSKRG
EVYV