| New model in OGS2.0 | DPOGS206808 |
|---|---|
| Genomic Position | scaffold1:- 3613523-3615647 |
| See gene structure | |
| CDS Length | 1626 |
| Paired RNAseq reads | 321 |
| Single RNAseq reads | 1252 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000630 (0.0) |
| Best Drosophila hit | ND |
| Best Human hit | WD repeat-containing protein 47 isoform 3 (9e-74) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP006111-PA [Tribolium castaneum] (4e-163) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP006111-PA [Tribolium castaneum] (1e-160) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR006595 CTLH, C-terminal LisH motif |
| Orthology group | MCL17560 |
Nucleotide sequence:
ATGCCATCGACACACCTTAGCCTCCGCGAAGACGACGTAGTGCGTCTAGCATTGGAGTTC
CTAAACTTGCGCGACTTGCATATCACCCAGCTGTCACTAGAGCGAGAAACCGGTGTCATC
AACGGCAATTACGCTGACGACGTACTGTTTCTGCGGCAACTGATTCTAGATGGACAGTGG
GATGATGTACTCGAGTTCATACAACCACTCAGCGCTCTGAAAGCATTTGAAGCTGATAAA
TTCAATTACGCAATTCTTAGACATAAATATATAGAACTTCTTTGCATTAGATCCGAGATA
AAGGCTTACAACAATGTTGAAAACATCGTTGATGAAGTCGTCAAAGTTCTTAGCGACTTA
GAAAAATTAGCTCCTTCTAAAGAAGAATATTCTAATTTGTGTCTTCTGCTTACACTTCCT
AGTATAACCGACCATACTCAATTTAAAAAATGGAACCCGAGTAATGCGAGGGTCCAATGT
TTCAGAGAAGTATATCCTCTGGTAGAACAATTTTTGCCTTGCGATAAAAAATCCTTTTCA
AGTGGAACAGCGCCAAAAAGTGCGAAAAACGATCGACTCATGCAATTACTTATAAAGGGG
ATTTTATACGAATCTTGCGTTAATTACTGCCAGGCCAAAGCCACTGGATCCAAAGAAGCA
CAGACAAATGAAGTAAACTTTTCCCGCCTATTAGATGGTTCCGGATTTGACGAGTCGGAC
TTGAGTTTGTTGTCGTGGCTTCAGTCAATCCCGGCGGAGACTTTCAGTGTACCTTTCGAG
CAACGAATGTTAAATGTTGACGTAGAAAAGTTAGAGCGACCGTCATTGCATACTTCTTGG
ACTGAACATATGCTTGTAACACCAATTAAACCGCGCACCTTTCCGCACTTGGCCATGCCA
TTTAGAAGACCTCGGTCTGCAGCAGATGCCATGACAAGATCTCTCCGACCTCTACCTGAC
GGAGCACCTCGGCATCCCGCGGTCATGGCTCTATCTGCAATCGACTACAGTCCCTCTTCC
TCTTATTTTGCTGGTTTCCATCTAACTGGAATTAAAGGCAACAAGCTAATGAACACGTCT
GTGGACAGATTGTTCGATAACAAAAACTGTGACAGTATTTACAACGGGCTAAATGAATCC
TTGAAACCCATCGAGGAGCAATTGAAACCCATCGGTGAATATACTAAGACCAACGAGAGC
AGTAGTATAGGAGCTTCCAACGCTACTACACCAGAGCATAGAGCACACGATTACTCAGCA
TCTACGTCCATATCAACGGCTGCAGTTTCAGAGCGACCTTCAACTGACGTCTTGCCCGGT
CCAGACGGGGACTTCCGTAGGGAATTACTCAAAGAATATCAGATGCAGAAGACGCGTGAG
TGCGATGATTACCTCCGTAATCTATGTTCTTCTGAAATCAGGACACAGAAACCGCAGGAG
CAAGTAGGTGACAGTGCATCCGCTTTTCCCTCTGCTGTGAAGTATCCTGCGCCTTCTAAT
GTGGAACAAAGTCAACCAATGCCAGACCATTCTAAGTACTTAAGAAAAAATGAGATCAAC
GAGTCTATTGAAGTGCCGGAAACGCCTAATTTACAGTTGAGTGACTGCTCTCCAAATATT
TTCTAA
Protein sequence:
MPSTHLSLREDDVVRLALEFLNLRDLHITQLSLERETGVINGNYADDVLFLRQLILDGQW
DDVLEFIQPLSALKAFEADKFNYAILRHKYIELLCIRSEIKAYNNVENIVDEVVKVLSDL
EKLAPSKEEYSNLCLLLTLPSITDHTQFKKWNPSNARVQCFREVYPLVEQFLPCDKKSFS
SGTAPKSAKNDRLMQLLIKGILYESCVNYCQAKATGSKEAQTNEVNFSRLLDGSGFDESD
LSLLSWLQSIPAETFSVPFEQRMLNVDVEKLERPSLHTSWTEHMLVTPIKPRTFPHLAMP
FRRPRSAADAMTRSLRPLPDGAPRHPAVMALSAIDYSPSSSYFAGFHLTGIKGNKLMNTS
VDRLFDNKNCDSIYNGLNESLKPIEEQLKPIGEYTKTNESSSIGASNATTPEHRAHDYSA
STSISTAAVSERPSTDVLPGPDGDFRRELLKEYQMQKTRECDDYLRNLCSSEIRTQKPQE
QVGDSASAFPSAVKYPAPSNVEQSQPMPDHSKYLRKNEINESIEVPETPNLQLSDCSPNI
F