| New model in OGS2.0 | DPOGS206813 |
|---|---|
| Genomic Position | scaffold1:- 3421076-3421917 |
| See gene structure | |
| CDS Length | 393 |
| Paired RNAseq reads | 362 |
| Single RNAseq reads | 1831 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013100 (2e-53) |
| Best Drosophila hit | small ribonucleoprotein Sm D3 (7e-45) |
| Best Human hit | small nuclear ribonucleoprotein Sm D3 (2e-44) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP012380-PA [Tribolium castaneum] (1e-51) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC015424 [Tribolium castaneum] (4e-45) |
| GeneOntology terms | GO:0007417 central nervous system development GO:0048542 lymph gland development GO:0007422 peripheral nervous system development GO:0030182 neuron differentiation GO:0007517 muscle organ development GO:0030532 small nuclear ribonucleoprotein complex GO:0000398 nuclear mRNA splicing, via spliceosome GO:0005681 spliceosomal complex GO:0005634 nucleus GO:0007052 mitotic spindle organization GO:0071011 precatalytic spliceosome GO:0071013 catalytic step 2 spliceosome |
| InterPro families | IPR010920 Like-Sm ribonucleoprotein (LSM)-related domain IPR001163 Like-Sm ribonucleoprotein (LSM) domain IPR006649 Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type |
| Orthology group | MCL12755 |
Nucleotide sequence:
ATGTCTATTGGTGTTCCTATTAAAGTACTTCACGAAGCGGAAGGCCATGTAGTGACTTGC
GAAACAAATACCGGCGAAGTTTACAGAGGGAAGCTAATAGAAGCTGAAGATAATATGAAT
TGTCAAATGACTTTGGTAACGGTTACATACAGAGATGGGCGAGTGGCACAGCTAGAAAAT
GTATATATAAGAGGTTCTAAGATACGTTTTCTTATATTACCGGATATGTTAAAAAACGCG
CCGATGTTTAAACGACAAGGAAACAAACCAACCGCTGGTCGCGGTAAAAGTGCTATACTA
CGAGCTCAAGCAGCGGGTAGAGGTCGTGCTAGTGGTCGAGGTGGAGGACATCGTGGAGGA
TGGCAGGGTGGCTCTGGACCATCGAGGCGGTAG
Protein sequence:
MSIGVPIKVLHEAEGHVVTCETNTGEVYRGKLIEAEDNMNCQMTLVTVTYRDGRVAQLEN
VYIRGSKIRFLILPDMLKNAPMFKRQGNKPTAGRGKSAILRAQAAGRGRASGRGGGHRGG
WQGGSGPSRR